RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 CDK15Q96Q40 435 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 CPEB1Q9BZB8 566 aaKnown RBP19.3■□□□□ 0.68
LIMS2-207ENST00000409808 PIF1Q9H611 641 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 PALMDQ9NP74 551 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 USE1Q9NZ43 259 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 SLC30A1Q9Y6M5 507 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 GSTA4O15217 222 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 RGS14O43566 566 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 NFATC1O95644 943 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 CCNA2P20248 432 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 ARL1P40616 181 aaPredicted RBP19.3■□□□□ 0.68
LIMS2-207ENST00000409808 MTHFRP42898 656 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 SKIV2LQ15477 1246 aaKnown RBP19.3■□□□□ 0.68
LIMS2-207ENST00000409808 PYCR3Q53H96 274 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 TMEM214Q6NUQ4 689 aaKnown RBP19.3■□□□□ 0.68
LIMS2-207ENST00000409808 MILR1Q7Z6M3 343 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 TDHQ8IZJ6 230 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 C8orf59Q8N0T1 100 aaPredicted RBP19.3■□□□□ 0.68
LIMS2-207ENST00000409808 OR2T12Q8NG77 320 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 DNAJB8Q8NHS0 232 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 CLEC1BQ9P126 229 aa19.3■□□□□ 0.68
LIMS2-207ENST00000409808 G3V2T6 193 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 GAPDHSO14556 408 aaPredicted RBP19.29■□□□□ 0.68
LIMS2-207ENST00000409808 CBFA2T3O75081 653 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 SCELO95171 688 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 MT-ND1P03886 318 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 RPS3P23396 243 aaKnown RBP eCLIP19.29■□□□□ 0.68
LIMS2-207ENST00000409808 EEF1B2P24534 225 aaKnown RBP19.29■□□□□ 0.68
LIMS2-207ENST00000409808 NFKBIAP25963 317 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 HTR6P50406 440 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 MTPNP58546 118 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 TOP3AQ13472 1001 aaPredicted RBP19.29■□□□□ 0.68
LIMS2-207ENST00000409808 NEDD8Q15843 81 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 ARSIQ5FYB1 569 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 GDPD4Q6W3E5 623 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 RFLNAQ6ZTI6 216 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 STK32CQ86UX6 486 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 RAB2BQ8WUD1 216 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 SLC13A3Q8WWT9 602 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 C19orf43Q9BQ61 176 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 KXD1Q9BQD3 176 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 SOX17Q9H6I2 414 aaPredicted RBP19.29■□□□□ 0.68
LIMS2-207ENST00000409808 ZFP14Q9HCL3 533 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 SARS2Q9NP81 518 aaKnown RBP19.29■□□□□ 0.68
LIMS2-207ENST00000409808 RHBDL2Q9NX52 303 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 LMCD1Q9NZU5 365 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 V9GYQ6 96 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 A0A1W2PPW3 197 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 LEFTY1O75610 366 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 WDR47O94967 919 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 CTSLP07711 333 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 ZNF12P17014 697 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 BPIP17213 487 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 GSTM2P28161 218 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 SOX11P35716 441 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 RECQLP46063 649 aaPredicted RBP19.29■□□□□ 0.68
LIMS2-207ENST00000409808 RGS4P49798 205 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 SELPLGQ14242 412 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 HABP4Q5JVS0 413 aaKnown RBP19.29■□□□□ 0.68
LIMS2-207ENST00000409808 SBSNQ6UWP8 590 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 ERLEC1Q96DZ1 483 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 IPPKQ9H8X2 491 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 ASIC5Q9NY37 505 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 BLOC1S6Q9UL45 172 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 CCL27Q9Y4X3 112 aa19.29■□□□□ 0.68
LIMS2-207ENST00000409808 POLR3HQ9Y535 204 aaPredicted RBP19.29■□□□□ 0.68
LIMS2-207ENST00000409808 FFAR2O15552 330 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 DNAJB5O75953 348 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 IL6P05231 212 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 INHBBP09529 407 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 UGT1A1P22309 533 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 UGT1A4P22310 534 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 LHCGRP22888 699 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 UGT1A3P35503 534 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 UGT1A5P35504 534 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 NNMTP40261 264 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 GABARAPL2P60520 117 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 TRAF3Q13114 568 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 RFTN2Q52LD8 501 aaPredicted RBP19.28■□□□□ 0.68
LIMS2-207ENST00000409808 LRRC66Q68CR7 880 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 ZNF555Q8NEP9 628 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 PJA1Q8NG27 643 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 SCRN2Q96FV2 425 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 PAIP1Q9H074 479 aaKnown RBP19.28■□□□□ 0.68
LIMS2-207ENST00000409808 GPN2Q9H9Y4 310 aaPredicted RBP19.28■□□□□ 0.68
LIMS2-207ENST00000409808 TRPV4Q9HBA0 871 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 ZDHHC4Q9NPG8 344 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 IL26Q9NPH9 171 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 CHCHD3Q9NX63 227 aaKnown RBP19.28■□□□□ 0.68
LIMS2-207ENST00000409808 ELOVL2Q9NXB9 296 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 ZFC3H1O60293 1989 aaKnown RBP19.28■□□□□ 0.68
LIMS2-207ENST00000409808 SLC2A4P14672 509 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 ZNF7P17097 686 aaPredicted RBP19.28■□□□□ 0.68
LIMS2-207ENST00000409808 MAP4P27816 1152 aaKnown RBP19.28■□□□□ 0.68
LIMS2-207ENST00000409808 DGKQP52824 942 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 NFATC3Q12968 1075 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 ADAM15Q13444 863 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 ABRAXAS2Q15018 415 aa19.28■□□□□ 0.68
LIMS2-207ENST00000409808 ZIK1Q3SY52 487 aaPredicted RBP19.28■□□□□ 0.68
LIMS2-207ENST00000409808 FGD3Q5JSP0 725 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms