RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 C5AR2Q9P296 337 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 ORC6Q9Y5N6 252 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 CKAP5Q14008 2032 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 TTC34A8MYJ7 566 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 TXNDC11Q6PKC3 985 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 ZFAND4Q86XD8 727 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 VRK3Q8IV63 474 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 CFAP206Q8IYR0 622 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 RGL4Q8IZJ4 473 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 SCML4Q8N228 414 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 OR4K1Q8NGD4 311 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 MAL2Q969L2 176 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 RIOK2Q9BVS4 552 aaKnown RBP13.06□□□□□ -0.32
COL6A2-204ENST00000409416 MRPL9Q9BYD2 267 aaKnown RBP13.06□□□□□ -0.32
COL6A2-204ENST00000409416 NDEL1Q9GZM8 345 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 LHPPQ9H008 270 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 LRTM1Q9HBL6 345 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 CD320Q9NPF0 282 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 ASAH2Q9NR71 780 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 PRKAG2Q9UGJ0 569 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 ZNF510Q9Y2H8 683 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
COL6A2-204ENST00000409416 TCRBV5S2A0A599 114 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 FAM155AB1AL88 458 aaPredicted RBP13.06□□□□□ -0.32
COL6A2-204ENST00000409416 IFRD1O00458 451 aaPredicted RBP13.06□□□□□ -0.32
COL6A2-204ENST00000409416 XPNPEP2O43895 674 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 MITFO75030 526 aaPredicted RBP13.06□□□□□ -0.32
COL6A2-204ENST00000409416 TGFB1P01137 390 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 CDH1P12830 882 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 CRATP43155 626 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 RAD23AP54725 363 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 SPRED1Q7Z699 444 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 THAP5Q7Z6K1 395 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 SMYD1Q8NB12 490 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 FRS2Q8WU20 508 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 SLC13A3Q8WWT9 602 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 PLEKHA8Q96JA3 519 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 INPP5KQ9BT40 448 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 BRD9Q9H8M2 597 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 HIDE1A8MVS5 230 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 WISP3O95389 354 aaPredicted RBP13.05□□□□□ -0.32
COL6A2-204ENST00000409416 ANXA5P08758 320 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 ENO2P09104 434 aaPredicted RBP13.05□□□□□ -0.32
COL6A2-204ENST00000409416 RAP2AP10114 183 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 PSMB9P28065 219 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 EMX2Q04743 252 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 HKDC1Q2TB90 917 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 CCSMST1Q4G0I0 132 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 RBFAQ8N0V3 343 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 SIX5Q8N196 739 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 OR7A2PQ8NGA2 310 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 GPR150Q8NGU9 434 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 DUS3LQ96G46 650 aaKnown RBP13.05□□□□□ -0.32
COL6A2-204ENST00000409416 MACROD1Q9BQ69 325 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 NUSAP1Q9BXS6 441 aaKnown RBP13.05□□□□□ -0.32
COL6A2-204ENST00000409416 TMEM98Q9Y2Y6 226 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 PCDHGA11Q9Y5H2 935 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 DGKAP23743 735 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 FMO3P31513 532 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 OR1E2P47887 323 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 VEGFBP49765 207 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 METAP1P53582 386 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 FOXM1Q08050 763 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 TYSND1Q2T9J0 566 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 ARTNQ5T4W7 220 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 SULT1C3Q6IMI6 304 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 GAREM2Q75VX8 874 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 SLC15A4Q8N697 577 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 KREMEN2Q8NCW0 462 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 CNIH3Q8TBE1 160 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 TMEM159Q96B96 161 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 IKZF5Q9H5V7 419 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 CARS2Q9HA77 564 aaKnown RBP13.05□□□□□ -0.32
COL6A2-204ENST00000409416 SPG21Q9NZD8 308 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 SLC25A13Q9UJS0 675 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 GVINP1Q7Z2Y8 2422 aa13.05□□□□□ -0.32
COL6A2-204ENST00000409416 SH3PXD2BA1X283 911 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 TMEM202A6NGA9 273 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 GRXCR1A8MXD5 290 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 H0Y858 1186 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 NRG2O14511 850 aaPredicted RBP13.04□□□□□ -0.32
COL6A2-204ENST00000409416 TGM5O43548 720 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 FKTNO75072 461 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 SERPINA1P01009 418 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 UMPSP11172 480 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 MYOGP15173 224 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 PIGAP37287 484 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 ALDH3A2P51648 485 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 BMXP51813 675 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 KPNA1P52294 538 aaPredicted RBP13.04□□□□□ -0.32
COL6A2-204ENST00000409416 CACNG1Q06432 222 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 NFATC3Q12968 1075 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 KCNAB2Q13303 367 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 NFATC2Q13469 925 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 TTLL9Q3SXZ7 439 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 RAET1GQ6H3X3 334 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 CXorf57Q6NSI4 855 aaKnown RBP13.04□□□□□ -0.32
COL6A2-204ENST00000409416 CROCCP3Q8IVE0 287 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 CLECL1Q8IZS7 167 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 GLMNQ92990 594 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms