RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 PCDHGA7Q9Y5G6 932 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 SDK2Q58EX2 2172 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 A0A1W2PPV9 198 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 FKBP9O95302 570 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 HIST1H2AGP0C0S8 130 aaPredicted RBP19.59■□□□□ 0.73
PTCD3-202ENST00000409326 SLC35E2BP0CK96 405 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 CCDC166P0CW27 439 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 HIST1H2ADP20671 130 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 CNTFP26441 200 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 IMPA1P29218 277 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 OAS2P29728 719 aaKnown RBP19.59■□□□□ 0.73
PTCD3-202ENST00000409326 ARL4DP49703 201 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 CSRP3P50461 194 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 AP1S2P56377 157 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 SH3BP2P78314 561 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 PPP1R3AQ16821 1122 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 CCDC91Q7Z6B0 441 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 TRIM73Q86UV7 250 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 UBLCP1Q8WVY7 318 aaPredicted RBP19.59■□□□□ 0.73
PTCD3-202ENST00000409326 SMPDL3AQ92484 453 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 USP7Q93009 1102 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 HIST1H2AHQ96KK5 128 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 UBXN10Q96LJ8 280 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 TAAR9Q96RI9 348 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 HIST1H2AJQ99878 128 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 H2AFJQ9BTM1 129 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 DDA1Q9BW61 102 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 TRIM54Q9BYV2 358 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 SNX15Q9NRS6 342 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 SOHLH2Q9NX45 425 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 SLC39A1Q9NY26 324 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.59■□□□□ 0.73
PTCD3-202ENST00000409326 STOX2Q9P2F5 926 aaPredicted RBP19.59■□□□□ 0.73
PTCD3-202ENST00000409326 FETUBQ9UGM5 382 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 PCDHGA3Q9Y5H0 932 aa19.59■□□□□ 0.73
PTCD3-202ENST00000409326 PABPN1LA6NDY0 278 aaKnown RBP19.58■□□□□ 0.72
PTCD3-202ENST00000409326 NPEPPSL1A6NEC2 478 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 C9orf172C9J069 976 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 E7ENX8 843 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 CDC7O00311 574 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 NVLO15381 856 aaKnown RBP19.58■□□□□ 0.72
PTCD3-202ENST00000409326 KRT38O76015 456 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 PVRP15151 417 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 SERPINB8P50452 374 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 TAP2Q03519 686 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 TMEM164Q5U3C3 297 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 CYB5D1Q6P9G0 228 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 MBOAT1Q6ZNC8 495 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 ADAMTSL2Q86TH1 951 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 LRRC56Q8IYG6 542 aaPredicted RBP19.58■□□□□ 0.72
PTCD3-202ENST00000409326 SYTL1Q8IYJ3 562 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 C19orf47Q8N9M1 422 aaKnown RBP19.58■□□□□ 0.72
PTCD3-202ENST00000409326 PPFIBP2Q8ND30 876 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 AENQ8WTP8 325 aaKnown RBP19.58■□□□□ 0.72
PTCD3-202ENST00000409326 PMEPA1Q969W9 287 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 ISL2Q96A47 359 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 CTNNAL1Q9UBT7 734 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 CELSR3Q9NYQ7 3312 aa19.58■□□□□ 0.72
PTCD3-202ENST00000409326 SPTBP11277 2137 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 PRAMEF10O60809 474 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 ALDOAP04075 364 aaKnown RBP19.57■□□□□ 0.72
PTCD3-202ENST00000409326 EBLN1P0CF75 366 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 FOLR1P15328 257 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 CD1DP15813 335 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 PSMB5P28074 263 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 GCAP28676 217 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 SLC5A2P31639 672 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 SLC26A3P40879 764 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 ATP6V0D1P61421 351 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 ACY1Q03154 408 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 FOXM1Q08050 763 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 CSHL1Q14406 222 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 KCNAB1Q14722 419 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 TSNQ15631 228 aaKnown RBP19.57■□□□□ 0.72
PTCD3-202ENST00000409326 SF1Q15637 639 aaKnown RBP19.57■□□□□ 0.72
PTCD3-202ENST00000409326 TMTC4Q5T4D3 741 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 DCAF12Q5T6F0 453 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 EMBQ6PCB8 327 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 SUSD1Q6UWL2 747 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 TBC1D1Q86TI0 1168 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-202ENST00000409326 OR2A1Q8NGT9 310 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 ZCCHC14Q8WYQ9 949 aaKnown RBP19.57■□□□□ 0.72
PTCD3-202ENST00000409326 TEFMQ96QE5 360 aaKnown RBP19.57■□□□□ 0.72
PTCD3-202ENST00000409326 OR6C1Q96RD1 312 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 PARD6BQ9BYG5 372 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 ASPSCR1Q9BZE9 553 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 CHRNA10Q9GZZ6 450 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 KLHL25Q9H0H3 589 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 APMAPQ9HDC9 416 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 PDE7BQ9NP56 450 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 ARL15Q9NXU5 204 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 OARD1Q9Y530 152 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 PCDHB11Q9Y5F2 797 aa19.57■□□□□ 0.72
PTCD3-202ENST00000409326 AHCTF1Q8WYP5 2266 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 MAP1BP46821 2468 aaKnown RBP19.56■□□□□ 0.72
PTCD3-202ENST00000409326 A0A087X1B8 175 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 POLR1CO15160 346 aaPredicted RBP19.56■□□□□ 0.72
PTCD3-202ENST00000409326 MAP3K7O43318 606 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 C2P06681 752 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 TYK2P29597 1187 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms