RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 VPS9D1Q9Y2B5 631 aa15.25■□□□□ 0.03
ATG4B-203ENST00000400772 MAN2B2Q9Y2E5 1009 aa15.25■□□□□ 0.03
ATG4B-203ENST00000400772 AP1M2Q9Y6Q5 423 aa15.25■□□□□ 0.03
ATG4B-203ENST00000400772 TLN1Q9Y490 2541 aaKnown RBP15.25■□□□□ 0.03
ATG4B-203ENST00000400772 FER1L5A0AVI2 2057 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 HELZ2Q9BYK8 2649 aaKnown RBP15.24■□□□□ 0.03
ATG4B-203ENST00000400772 CTAGE9A4FU28 777 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 ZSCAN9O15535 394 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-203ENST00000400772 PSIP1O75475 530 aaKnown RBP15.24■□□□□ 0.03
ATG4B-203ENST00000400772 BANF1O75531 89 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 HAUS5O94927 633 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 PSMB5P28074 263 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 CCNFP41002 786 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 GRIA3P42263 894 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 MPP1Q00013 466 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 DHX9Q08211 1270 aaKnown RBP15.24■□□□□ 0.03
ATG4B-203ENST00000400772 NCF4Q15080 339 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 SF1Q15637 639 aaKnown RBP15.24■□□□□ 0.03
ATG4B-203ENST00000400772 CYP2A13Q16696 494 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 KLHL38Q2WGJ6 581 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 MSS51Q4VC12 460 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 C1orf189Q5VU69 101 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 TLDC1Q6P9B6 456 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 CAPZA3Q96KX2 299 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 RAB11FIP5Q9BXF6 653 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-203ENST00000400772 DHCR7Q9UBM7 475 aaKnown RBP15.24■□□□□ 0.03
ATG4B-203ENST00000400772 MRFAP1Q9Y605 127 aa15.24■□□□□ 0.03
ATG4B-203ENST00000400772 ARHGEF33A8MVX0 844 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 E5RI56 91 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 FANCGO15287 622 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 KLF7O75840 302 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-203ENST00000400772 ERGP11308 486 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 NR1D1P20393 614 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 AGXTP21549 392 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 GNG11P61952 73 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 YBX1P67809 324 aaKnown RBP15.23■□□□□ 0.03
ATG4B-203ENST00000400772 LACTB2Q53H82 288 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-203ENST00000400772 HSP90AA5PQ58FG0 334 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 CPZQ66K79 652 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 CYHR1Q6ZMK1 362 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 ATG14Q6ZNE5 492 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 IGDCC3Q8IVU1 814 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 LMNTD2Q8IXW0 634 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.23■□□□□ 0.03
ATG4B-203ENST00000400772 OR2A1Q8NGT9 310 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 OR9A1PQ8NGU1 263 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 PROKR1Q8TCW9 393 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 MAGEC3Q8TD91 643 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 ZUFSPQ96AP4 578 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 TRIM4Q9C037 500 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 PLAC1Q9HBJ0 212 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 ENAMQ9NRM1 1142 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 IARS2Q9NSE4 1012 aaKnown RBP15.23■□□□□ 0.03
ATG4B-203ENST00000400772 SPATA7Q9P0W8 599 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 KLHL42Q9P2K6 505 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 ASIC3Q9UHC3 531 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 FBXO5Q9UKT4 447 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 SNX7Q9UNH6 387 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 TP53TG5Q9Y2B4 290 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 KLK4Q9Y5K2 254 aa15.23■□□□□ 0.03
ATG4B-203ENST00000400772 MED13Q9UHV7 2174 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 GCN1Q92616 2671 aaKnown RBP15.22■□□□□ 0.03
ATG4B-203ENST00000400772 SPTA1P02549 2419 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 ARGFXA6NJG6 315 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 TARM1B6A8C7 271 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 MYO1CO00159 1063 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 NRP2O60462 931 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 CTSVO60911 334 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 CNOT3O75175 753 aaKnown RBP15.22■□□□□ 0.03
ATG4B-203ENST00000400772 RFPL1O75677 317 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 FKBP9O95302 570 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 PDGFAP04085 211 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 PGAM1P18669 254 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 ITGAXP20702 1163 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 GABRB3P28472 473 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 DCDP81605 110 aaKnown RBP15.22■□□□□ 0.03
ATG4B-203ENST00000400772 TIAL1Q01085 375 aaKnown RBP eCLIP15.22■□□□□ 0.034e-6■■□□□ 12.4
ATG4B-203ENST00000400772 CHAF1BQ13112 559 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 CUL1Q13616 776 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 TCTN3Q6NUS6 607 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 NEK10Q6ZWH5 1172 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 PCGF5Q86SE9 256 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 KCNMB4Q86W47 210 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 TMEM151BQ8IW70 566 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 KLHL7Q8IXQ5 586 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 OR2L3Q8NG85 312 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 CALML6Q8TD86 181 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 KCNJ9Q92806 393 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 PWWP2AQ96N64 755 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 ZNF285Q96NJ3 590 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 PKP4Q99569 1192 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 MIPEPQ99797 713 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 EBNA1BP2Q99848 306 aaKnown RBP15.22■□□□□ 0.03
ATG4B-203ENST00000400772 DHRS4Q9BTZ2 278 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 SLC22A11Q9NSA0 550 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 INTS7Q9NVH2 962 aaKnown RBP15.22■□□□□ 0.03
ATG4B-203ENST00000400772 DHRS7Q9Y394 339 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 PCSK5Q92824 1860 aa15.22■□□□□ 0.03
ATG4B-203ENST00000400772 CCDC88CQ9P219 2028 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms