RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 NAGAP17050 411 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 HMGA1P17096 107 aaKnown RBP9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 LBPP18428 481 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 CASP2P42575 452 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 MVKQ03426 396 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 EMX2Q04743 252 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 ELAVL2Q12926 359 aaKnown RBP9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 TARDBPQ13148 414 aaKnown RBP eCLIP9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 GPR50Q13585 617 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 RAPSNQ13702 412 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 STARD3Q14849 445 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 BCL7AQ4VC05 210 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 AGAP9Q5VTM2 703 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 PSRC1Q6PGN9 363 aaPredicted RBP9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 DNAJB7Q7Z6W7 309 aaPredicted RBP9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 DDX53Q86TM3 631 aaKnown RBP9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 CNTN4Q8IWV2 1026 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 MICU2Q8IYU8 434 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 NPWQ8N729 165 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 RNF139Q8WU17 664 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 FRS2Q8WU20 508 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 TSPEARQ8WU66 669 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 OMA1Q96E52 524 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 TCEAL4Q96EI5 215 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 PHOX2BQ99453 314 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 KIFC1Q9BW19 673 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 IGFLR1Q9H665 355 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 NARFLQ9H6Q4 476 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 SYTL2Q9HCH5 934 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 ZFP14Q9HCL3 533 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 SCN3BQ9NY72 215 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 SLAMF8Q9P0V8 285 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 OR12D3Q9UGF7 316 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 FZD10Q9ULW2 581 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 NOTCH4Q99466 2003 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 MYO16Q9Y6X6 1858 aa9.9□□□□□ -0.82
HMGCLL1-205ENST00000398661 A0A1W2PRU2 124 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 GNGT2O14610 69 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 EEDO75530 441 aaKnown RBP9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 TSPAN9O75954 239 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 PGLSO95336 258 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 CST1P01037 141 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 RBP1P09455 135 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 HGFP14210 728 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 ADRA1BP35368 520 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 CCR2P41597 374 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 AP2S1P53680 142 aaPredicted RBP9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 POU4F1Q01851 419 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 UNC50Q53HI1 259 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 ZNF678Q5SXM1 525 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 SPESP1Q6UW49 350 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 ZNF517Q6ZMY9 492 aaPredicted RBP9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 ARHGAP36Q6ZRI8 547 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 DTWD1Q8N5C7 304 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 AMER2Q8N7J2 671 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 TWIST2Q8WVJ9 160 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 CLP1Q92989 425 aaKnown RBP9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 SLC38A4Q969I6 547 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 NT5C3BQ969T7 300 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 PYCR2Q96C36 320 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 TUBGCP3Q96CW5 907 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 HTATIP2Q9BUP3 242 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 GON7Q9BXV9 100 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 LRRC3Q9BY71 257 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 ZBP1Q9H171 429 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 CARS2Q9HA77 564 aaKnown RBP9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 DIABLOQ9NR28 239 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 INTS7Q9NVH2 962 aaKnown RBP9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 COMMD8Q9NX08 183 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 BTBD3Q9Y2F9 522 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 ACTL7AQ9Y615 435 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 KIAA1671Q9BY89 1806 aa9.9□□□□□ -0.83
HMGCLL1-205ENST00000398661 SLC12A8A0AV02 714 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 OR2A25A4D2G3 310 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 H7C4K7 107 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 CTDSP2O14595 271 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 DSCR3O14972 297 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 RGS10O43665 173 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 AIREO43918 545 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 PAGE1O75459 146 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 MTRF1O75570 445 aaKnown RBP9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 ABLIM3O94929 683 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 C1RP00736 705 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 FTH1P02794 183 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 LTA4HP09960 611 aaKnown RBP9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 TRAPPC2P0DI81 140 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 TRAPPC2BP0DI82 140 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 IL7P13232 177 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 ITGB6P18564 788 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 SLC1A2P43004 574 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 SH3BP2P78314 561 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 LAPTM5Q13571 262 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 PAFAH1B3Q15102 231 aaKnown RBP9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 FAM214AQ32MH5 1076 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 PARP15Q460N3 678 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 LAIR1Q6GTX8 287 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 TMEM150AQ86TG1 271 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 RAB43Q86YS6 212 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 ZDHHC17Q8IUH5 632 aa9.89□□□□□ -0.83
HMGCLL1-205ENST00000398661 TOR1AIP2Q8NFQ8 470 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms