RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 TRIP4Q15650 581 aaPredicted RBP15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 KCNA10Q16322 511 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 ZRANB3Q5FWF4 1079 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 NADSYN1Q6IA69 706 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 LAIR2Q6ISS4 152 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 IDO2Q6ZQW0 420 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 UBQLNLQ8IYU4 475 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 LPCAT1Q8NF37 534 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 FBXO32Q969P5 355 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 LGALS12Q96DT0 336 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 SLC47A1Q96FL8 570 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 UGT2B28Q9BY64 529 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 FBXO44Q9H4M3 255 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 PDFQ9HBH1 243 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 TRIM39Q9HCM9 518 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 INTS6Q9UL03 887 aaKnown RBP15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 WBP11Q9Y2W2 641 aaKnown RBP15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 HS6ST1O60243 411 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 TYMPP19971 482 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 MAGP20916 626 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 PIK3CGP48736 1102 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 ABRAXAS2Q15018 415 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 ZNF404Q494X3 552 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 ATAD1Q8NBU5 361 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 OR4F6Q8NGB9 312 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 ZFYVE19Q96K21 471 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 MKRN2Q9H000 416 aaKnown RBP15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 ACTR8Q9H981 624 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 OPTCQ9UBM4 332 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 DNAJB9Q9UBS3 223 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 RIMKLBQ9ULI2 386 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 C2orf81A6NN90 581 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 ARNTLO00327 626 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 ANKRD28O15084 1053 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 SLC2A4P14672 509 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 POLR2CP19387 275 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 GGT5P36269 586 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 RPL38P63173 70 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 SYT6Q5T7P8 510 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 GOLGA7Q7Z5G4 137 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 NECAB2Q7Z6G3 386 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 ADAMTSL2Q86TH1 951 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 ZNF566Q969W8 418 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 FAM162AQ96A26 154 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 ZHX1-C8orf76Q96EF9 292 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 CINPQ9BW66 212 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 RPRD1BQ9NQG5 326 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 PCDHB8Q9UN66 801 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 U3KQV3 271 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 HTTP42858 3142 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 GBF1Q92538 1859 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 PRKD3O94806 890 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 GTF2E2P29084 291 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 ST13P50502 369 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 YBEYP58557 167 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 PRKCZQ05513 592 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 TAF1AQ15573 450 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 SPATC1Q76KD6 591 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 TMEM179BQ7Z7N9 219 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 HORMAD1Q86X24 394 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 FAM109AQ8N4B1 249 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 FRS2Q8WU20 508 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 SLC13A3Q8WWT9 602 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 NCLNQ969V3 563 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 ST6GAL2Q96JF0 529 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 ZNF717Q9BY31 904 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 MIR1-1HGQ9H1L0 117 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 PAQR5Q9NXK6 330 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 BOLA1Q9Y3E2 137 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 PCDHGC4Q9Y5F7 938 aa15.6■□□□□ 0.09
CHMP1A-201ENST00000397901 FAM92AA1XBS5 289 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 FADS2P1A8MWK0 482 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 OR7A17O14581 309 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 TMCC2O75069 709 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 MYCP01106 439 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 HOXD9P28356 352 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 CCND3P30281 292 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 ARPP19P56211 112 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 ISL1P61371 349 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 CAP1Q01518 475 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 TRAF3Q13114 568 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 FAM174BQ3ZCQ3 159 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 YIF1BQ5BJH7 314 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 ZNF280BQ86YH2 543 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 CADM2Q8N3J6 435 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 PSD4Q8NDX1 1056 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 ZNF548Q8NEK5 533 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 PJA1Q8NG27 643 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 OR8J3Q8NGG0 315 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 OR10Q1Q8NGQ4 319 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 ITCHQ96J02 903 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 MGME1Q9BQP7 344 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 RETREG1Q9H6L5 497 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 EPS8L2Q9H6S3 715 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 KAT8Q9H7Z6 458 aaKnown RBP15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 PRG3Q9Y2Y8 225 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 ARIH1Q9Y4X5 557 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 BRCA2P51587 3418 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 GRXCR2A6NFK2 248 aa15.59■□□□□ 0.09
CHMP1A-201ENST00000397901 FFAR3O14843 346 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms