RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CLCQ05315 142 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 PRKG2Q13237 762 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 SLC14A1Q13336 389 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 ARL13AQ5H913 290 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 AGTRAPQ6RW13 159 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 ZNF548Q8NEK5 533 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 LMX1AQ8TE12 382 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 ZNF480Q8WV37 535 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 TRMOQ9BU70 441 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 SCNM1Q9BWG6 230 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 CEP295Q9C0D2 2601 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 POLG2Q9UHN1 485 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 BTBD3Q9Y2F9 522 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 TDRKHQ9Y2W6 561 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 AKAP13Q12802 2813 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 USP24Q9UPU5 2620 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 PRAMEF33A0A0G2JMD5 474 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 K7EPI3 171 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 AQP9O43315 295 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 STK16O75716 305 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 HSPA4LO95757 839 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 TSPAN8P19075 237 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 SLC19A1P41440 591 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 RXRGP48443 463 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 GALNT1Q10472 559 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 PTCHD3Q3KNS1 767 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 CGB2Q6NT52 195 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 LRRC70Q7Z2Q7 622 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 GKN2Q86XP6 184 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 NAXDQ8IW45 347 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 NAGSQ8N159 534 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 SDR16C5Q8N3Y7 309 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 OR56A3Q8NH54 315 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 BAHD1Q8TBE0 780 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 PPP4R1Q8TF05 950 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 PATE1Q8WXA2 126 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 ATG10Q9H0Y0 220 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 SLC32A1Q9H598 525 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 SPATA7Q9P0W8 599 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 OPTCQ9UBM4 332 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 HAO1Q9UJM8 370 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 KLK13Q9UKR3 277 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 PLAGL1Q9UM63 463 aa16.42■□□□□ 0.22
TSPAN4-205ENST00000397406 OR5K4A6NMS3 321 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 PPP6CO00743 305 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 UBFD1O14562 309 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 CCNT2O60583 730 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 SNUPNO95149 360 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 XRCC1P18887 633 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 NDUFS1P28331 727 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 PNLIPRP1P54315 467 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 GTF2H2Q13888 395 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 ARHGAP19Q14CB8 494 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 SHBQ15464 509 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 ZNF423Q2M1K9 1284 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 GTF2H2CQ6P1K8 395 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 GOLGA7Q7Z5G4 137 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 SLCO6A1Q86UG4 719 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 SFTPA2Q8IWL1 248 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 LRRC56Q8IYG6 542 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 PPFIBP2Q8ND30 876 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 FAM46DQ8NEK8 389 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 GATA6Q92908 595 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 PYCR2Q96C36 320 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 CXorf40BQ96DE9 158 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 IL17FQ96PD4 163 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 ELF4Q99607 663 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 NRTNQ99748 197 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 KIR3DX1Q9H7L2 352 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 SEMA4BQ9NPR2 832 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 UCKL1Q9NWZ5 548 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 TOR4AQ9NXH8 423 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 RAP2CQ9Y3L5 183 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 COLEC10Q9Y6Z7 277 aa16.41■□□□□ 0.22
TSPAN4-205ENST00000397406 TRBV23OR9-2A0A075B6M9 112 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 KIR2DS5A0A0G2JLQ3 304 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 A0A0G2JNG1 304 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 LMO7DNF2Z398 122 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 KIR2DS3K7RE56 304 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 YY2O15391 372 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 SDC3O75056 442 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 WDR47O94967 919 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 ZNF883P0CG24 379 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 SLC2A4P14672 509 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 MPSTP25325 297 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 UBE2IP63279 158 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 LCP2Q13094 533 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 NAE1Q13564 534 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 KRT33BQ14525 404 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 KIR2DS5Q14953 304 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 TRIP6Q15654 476 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 CYP2A13Q16696 494 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 CRLF3Q8IUI8 442 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 SFRP1Q8N474 314 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 CHCHD4Q8N4Q1 142 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 TEX9Q8N6V9 391 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 ZNF781Q8N8C0 355 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 LMNTD1Q8N9Z9 388 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 OR52E1Q8NGJ3 308 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 TRPC4APQ8TEL6 797 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms