RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 OR11G2Q8NGC1 345 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 KRT35Q92764 455 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 THOC3Q96J01 351 aaKnown RBP16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 CNDP1Q96KN2 507 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 ZNF285Q96NJ3 590 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 GOLPH3Q9H4A6 298 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 CSAG2Q9Y5P2 127 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 ANKRD12Q6UB98 2062 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 ARHGAP10A1A4S6 786 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 DYTNA2CJ06 578 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 AKR1B15C9JRZ8 316 aaPredicted RBP16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 PRSS44E7EML9 344 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 JRKO75564 520 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 CTSBP07858 339 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 RIPPLY3P57055 190 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 AP2B1P63010 937 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 OCA2Q04671 838 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 SPARCL1Q14515 664 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 POU6F1Q14863 301 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 NAA25Q14CX7 972 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 BRD3Q15059 726 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 SF1Q15637 639 aaKnown RBP16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 FIGLAQ6QHK4 219 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 NLRP9Q7RTR0 991 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 CCDC170Q8IYT3 715 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 RAB42Q8N4Z0 105 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 CHST11Q9NPF2 352 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 RIMKLBQ9ULI2 386 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 PRSS21Q9Y6M0 314 aa16.77■□□□□ 0.28
EXOSC3-202ENST00000396521 CSMD1Q96PZ7 3565 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 POLQO75417 2590 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 OTOGQ6ZRI0 2925 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 TRAV17A0A0B4J275 112 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 GOLGA6L9A6NEM1 432 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 ERI2A8K979 691 aaKnown RBP16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 MASP2O00187 686 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 ATXN8OSP0DMR3 200 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 ACPPP15309 386 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 PEBP1P30086 187 aaKnown RBP16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 PTGER4P35408 488 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 RWDD2BP57060 319 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 MCEMP1Q8IX19 187 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 KBTBD2Q8IY47 623 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 LINC01555Q8NAE3 123 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 OR2L8Q8NGY9 312 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 SELENOSQ9BQE4 189 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 CRB3Q9BUF7 120 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 CARD6Q9BX69 1037 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 SUCOQ9UBS9 1254 aaKnown RBP16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 SLC39A10Q9ULF5 831 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 KLK4Q9Y5K2 254 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 FAM169AQ9Y6X4 670 aa16.76■□□□□ 0.27
EXOSC3-202ENST00000396521 FER1L5A0AVI2 2057 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 MAP2K7O14733 419 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 APOA4P06727 396 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 PRSS56P0CW18 603 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 TPH1P17752 444 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 FOXN2P32314 431 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 FOXL2P58012 376 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 ARG2P78540 354 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 ZNF324BQ6AW86 544 aaPredicted RBP16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 COX15Q7KZN9 410 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 FJX1Q86VR8 437 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 LMNTD1Q8N9Z9 388 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 OR1N1Q8NGS0 311 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 HAS2Q92819 552 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 PEX13Q92968 403 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 MENTQ9BUN1 341 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 SOX17Q9H6I2 414 aaPredicted RBP16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 ZNF304Q9HCX3 659 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 ZNF282Q9UDV7 671 aaPredicted RBP16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 PLAGL1Q9UM63 463 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 CDC14AQ9UNH5 594 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 PCDHA13Q9Y5I0 950 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 PCM1Q15154 2024 aa16.75■□□□□ 0.27
EXOSC3-202ENST00000396521 RASGRF2O14827 1237 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 PRPF4O43172 522 aaKnown RBP eCLIP16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 GPC4O75487 556 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 EMP3P54852 163 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 HSPA14Q0VDF9 509 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 AARS2Q5JTZ9 985 aaKnown RBP16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 ATG9BQ674R7 924 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 AFTPHQ6ULP2 937 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 RPTNQ6XPR3 784 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 LINC00696Q6ZRV3 163 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 RIPOR1Q6ZS17 1223 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 NDUFAF7Q7L592 441 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 DNAJB8Q8NHS0 232 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 GSDMBQ8TAX9 411 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 STT3BQ8TCJ2 826 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 NR4A3Q92570 626 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 RAD51AP1Q96B01 352 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 MIEF2Q96C03 454 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 UNKQ9C0B0 810 aaKnown RBP16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 CTSFQ9UBX1 484 aa16.74■□□□□ 0.27
EXOSC3-202ENST00000396521 SVILO95425 2214 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 MDC1Q14676 2089 aaKnown RBP16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 A0A1W2PQ72 361 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 HYKKA2RU49 373 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 CCDC162PA2VCL2 907 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms