RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 NKD2Q969F2 451 aaPredicted RBP8.24□□□□□ -1.09
NDE1-202ENST00000396355 COQ10AQ96MF6 247 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 BBS4Q96RK4 519 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 LTB4R2Q9NPC1 389 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 TAS2R3Q9NYW6 316 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 MKLN1Q9UL63 735 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 RAP2CQ9Y3L5 183 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 RANBP2P49792 3224 aaKnown RBP8.24□□□□□ -1.09
NDE1-202ENST00000396355 C9IYK1 514 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 INMT-MINDY4F8WBC2 141 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 MID1O15344 667 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 B4GALT5O43286 388 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 SLITRK5O94991 958 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 ARIH2O95376 493 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 ZNF35P13682 527 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 CDH5P33151 784 aaPredicted RBP8.24□□□□□ -1.09
NDE1-202ENST00000396355 SLC18A1P54219 525 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 TSPAN5P62079 268 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 CAMK1Q14012 370 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 PIGGQ5H8A4 983 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 ZNF667Q5HYK9 610 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 HS3ST5Q8IZT8 346 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 WDSUB1Q8N9V3 476 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 DNAJA4Q8WW22 397 aaPredicted RBP8.24□□□□□ -1.09
NDE1-202ENST00000396355 FAM122AQ96E09 287 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 CELF6Q96J87 481 aaKnown RBP8.24□□□□□ -1.09
NDE1-202ENST00000396355 TWNKQ96RR1 684 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 CPXM1Q96SM3 734 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 BIN3Q9NQY0 253 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 PDGFCQ9NRA1 345 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 CBY1Q9Y3M2 126 aa8.24□□□□□ -1.09
NDE1-202ENST00000396355 TEX13CA0A0J9YWL9 993 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 A0A0J9YYE9 177 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 AGAP5A6NIR3 686 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 GRXCR1A8MXD5 290 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 ISM1B1AKI9 464 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 ACOX3O15254 700 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 SLC22A5O76082 557 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 RPLP0P05388 317 aaKnown RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 ITGAVP06756 1048 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 IQCF3P0C7M6 154 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 COL9A1P20849 921 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 FSHRP23945 695 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 AKAP5P24588 427 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 ICAM3P32942 547 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 MAP2K6P52564 334 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 LIPEQ05469 1076 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 KCNAB2Q13303 367 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 ADAM15Q13444 863 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 KCNA10Q16322 511 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 ADPRMQ3LIE5 342 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 CCDC157Q569K6 752 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 RABL3Q5HYI8 236 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 SLFN12LQ6IEE8 588 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 ZNF782Q6ZMW2 699 aaPredicted RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 ZNF605Q86T29 641 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 OR13F1Q8NGS4 319 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 GANCQ8TET4 914 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 ZUFSPQ96AP4 578 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 SDCBP2Q9H190 292 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 TMEM134Q9H6X4 195 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 RPF1Q9H9Y2 349 aaKnown RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 CARS2Q9HA77 564 aaKnown RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 ABCB8Q9NUT2 735 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 RNF6Q9Y252 685 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 THSD7BQ9C0I4 1608 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 GSAPA4D1B5 854 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 SLC9A3R1O14745 358 aaPredicted RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 METTL18O95568 372 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 STAU1O95793 577 aaKnown RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 SLC2A2P11168 524 aaPredicted RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 POU3F3P20264 500 aaPredicted RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 DNASE1P24855 282 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 CA5AP35218 305 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 RGS7P49802 495 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 CLCNKBP51801 687 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 CDH8P55286 799 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 HTRA4P83105 476 aaPredicted RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 DAG1Q14118 895 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 KCNJ11Q14654 390 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 LY6KQ17RY6 165 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 TOR1AIP1Q5JTV8 583 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 LRRC38Q5VT99 294 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 CXCL17Q6UXB2 119 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 PRSS42Q7Z5A4 293 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 FAM126BQ8IXS8 530 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 GPR65Q8IYL9 337 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 NIPA2Q8N8Q9 360 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 NAT8LQ8N9F0 302 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 TRAPPC12Q8WVT3 735 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 RBPMSQ93062 196 aaKnown RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 C1GALT1C1Q96EU7 318 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 PIWIL1Q96J94 861 aaKnown RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 CCDC74BQ96LY2 380 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 TMEM74Q96NL1 305 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 RBM14Q96PK6 669 aaKnown RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 ERMAPQ96PL5 475 aaPredicted RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 ACO2Q99798 780 aaKnown RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 GPR63Q9BZJ6 419 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms