RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 DSCR3O14972 297 aa15.73■□□□□ 0.11
DDR1-229ENST00000396342 VPS26AO75436 327 aa15.73■□□□□ 0.11
DDR1-229ENST00000396342 MMP11P24347 488 aa15.73■□□□□ 0.11
DDR1-229ENST00000396342 ZNF385CQ66K41 422 aaPredicted RBP15.73■□□□□ 0.11
DDR1-229ENST00000396342 OVCH1Q7RTY7 1134 aa15.73■□□□□ 0.11
DDR1-229ENST00000396342 RBSNQ9H1K0 784 aa15.73■□□□□ 0.11
DDR1-229ENST00000396342 EIF2B3Q9NR50 452 aaKnown RBP15.73■□□□□ 0.11
DDR1-229ENST00000396342 FAM114A2Q9NRY5 505 aa15.73■□□□□ 0.11
DDR1-229ENST00000396342 SEMA3GQ9NS98 782 aa15.73■□□□□ 0.11
DDR1-229ENST00000396342 CDC14AQ9UNH5 594 aa15.73■□□□□ 0.11
DDR1-229ENST00000396342 ZKSCAN5Q9Y2L8 839 aa15.73■□□□□ 0.11
DDR1-229ENST00000396342 NBASA2RRP1 2371 aa15.73■□□□□ 0.11
DDR1-229ENST00000396342 ZNF106Q9H2Y7 1883 aaKnown RBP15.73■□□□□ 0.11
DDR1-229ENST00000396342 TCP11X1B4DZS4 312 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 GPC4O75487 556 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 SLCO2B1O94956 709 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 AOAHP28039 575 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 CMPK1P30085 196 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 CDC25BP30305 580 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 EIF3BP55884 814 aaKnown RBP15.72■□□□□ 0.11
DDR1-229ENST00000396342 CDK16Q00536 496 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 ACVR1Q04771 509 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 OASLQ15646 514 aaKnown RBP15.72■□□□□ 0.11
DDR1-229ENST00000396342 CCNG2Q16589 344 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 EIF2S3LQ2VIR3 472 aaKnown RBP15.72■□□□□ 0.11
DDR1-229ENST00000396342 TUBB8Q3ZCM7 444 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 IGFL3Q6UXB1 125 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 CISD2Q8N5K1 135 aaKnown RBP15.72■□□□□ 0.11
DDR1-229ENST00000396342 RBMXL3Q8N7X1 1067 aaKnown RBP15.72■□□□□ 0.11
DDR1-229ENST00000396342 C5orf34Q96MH7 638 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 NRTNQ99748 197 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 CCDC68Q9H2F9 335 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 CHRAC1Q9NRG0 131 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 SAMD15Q9P1V8 674 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 FBXL4Q9UKA2 621 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 PTPN13Q12923 2485 aa15.72■□□□□ 0.11
DDR1-229ENST00000396342 LRRK2Q5S007 2527 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 ANKUB1A6NFN9 424 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 PHF2O75151 1096 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 CCNDBP1O95273 360 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 EIF2S1P05198 315 aaKnown RBP15.71■□□□□ 0.11
DDR1-229ENST00000396342 MYBL2P10244 700 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 CHRM3P20309 590 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 CXCR2P25025 360 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 HSD17B2P37059 387 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 GRIA3P42263 894 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 PER3P56645 1201 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 VSX2P58304 361 aaPredicted RBP15.71■□□□□ 0.11
DDR1-229ENST00000396342 TSTA3Q13630 321 aaPredicted RBP15.71■□□□□ 0.11
DDR1-229ENST00000396342 NR6A1Q15406 480 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 TTLL9Q3SXZ7 439 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 PRAMEF13Q5VWM6 474 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 MRPL14Q6P1L8 145 aaKnown RBP15.71■□□□□ 0.11
DDR1-229ENST00000396342 PRMT9Q6P2P2 845 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 CASC4Q6P4E1 433 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 KRT222Q8N1A0 295 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 IL17FQ96PD4 163 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 TCF12Q99081 682 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 WDR77Q9BQA1 342 aaPredicted RBP15.71■□□□□ 0.11
DDR1-229ENST00000396342 CRB3Q9BUF7 120 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 YIPF2Q9BWQ6 316 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 KLHL20Q9Y2M5 609 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 CAPN6Q9Y6Q1 641 aa15.71■□□□□ 0.11
DDR1-229ENST00000396342 NAV2Q8IVL1 2488 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 RP1L1Q8IWN7 2480 aaPredicted RBP15.7■□□□□ 0.1
DDR1-229ENST00000396342 IQCF5A8MTL0 148 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 RPS3P23396 243 aaKnown RBP eCLIP15.7■□□□□ 0.13e-6■■■□□ 18.1
DDR1-229ENST00000396342 RPA3P35244 121 aaPredicted RBP15.7■□□□□ 0.1
DDR1-229ENST00000396342 GABRA4P48169 554 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 SOX8P57073 446 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 AP2B1P63010 937 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 MUM1Q2TAK8 710 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 PLEKHN1Q494U1 663 aaPredicted RBP15.7■□□□□ 0.1
DDR1-229ENST00000396342 WASHC2DQ5SRD0 308 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 CNSTQ6PJW8 725 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 ZNF534Q76KX8 674 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 PPP1R32Q7Z5V6 425 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 LMNTD1Q8N9Z9 388 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 DNAJB14Q8TBM8 379 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 RERGQ96A58 199 aaPredicted RBP15.7■□□□□ 0.1
DDR1-229ENST00000396342 MIEF2Q96C03 454 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 SNRNP40Q96DI7 357 aaKnown RBP15.7■□□□□ 0.1
DDR1-229ENST00000396342 CNDP1Q96KN2 507 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 MIPEPQ99797 713 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 ZNF304Q9HCX3 659 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 SPATA7Q9P0W8 599 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 ZNF282Q9UDV7 671 aaPredicted RBP15.7■□□□□ 0.1
DDR1-229ENST00000396342 CIDEBQ9UHD4 219 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 SLC5A6Q9Y289 635 aa15.7■□□□□ 0.1
DDR1-229ENST00000396342 HYKKA2RU49 373 aa15.69■□□□□ 0.1
DDR1-229ENST00000396342 CYSRT1A8MQ03 144 aa15.69■□□□□ 0.1
DDR1-229ENST00000396342 TXNDC9O14530 226 aa15.69■□□□□ 0.1
DDR1-229ENST00000396342 MAP2K7O14733 419 aa15.69■□□□□ 0.1
DDR1-229ENST00000396342 VAPBO95292 243 aa15.69■□□□□ 0.1
DDR1-229ENST00000396342 ESR1P03372 595 aa15.69■□□□□ 0.1
DDR1-229ENST00000396342 CATP04040 527 aaKnown RBP15.69■□□□□ 0.1
DDR1-229ENST00000396342 ANXA5P08758 320 aa15.69■□□□□ 0.1
DDR1-229ENST00000396342 PKMP14618 531 aaKnown RBP15.69■□□□□ 0.1
DDR1-229ENST00000396342 RPL22P35268 128 aaKnown RBP15.69■□□□□ 0.1
DDR1-229ENST00000396342 GRIA1P42261 906 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms