RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 RDH12Q96NR8 316 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 RHNO1Q9BSD3 238 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 FEM1AQ9BSK4 669 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 TMEM45AQ9NWC5 275 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 SLC25A37Q9NYZ2 338 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 SCAMP3O14828 347 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 KDELR3O43731 214 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 ULK1O75385 1050 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 SERPINA1P01009 418 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 FTH1P02794 183 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 CR2P20023 1033 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 MAGEA11P43364 429 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 SLC11A2P49281 568 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 ZNF177Q13360 481 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 PON2Q15165 354 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 CATSPEREQ5SY80 951 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 DEPDC1Q5TB30 811 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 FAM151BQ6UXP7 276 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 ANKS3Q6ZW76 656 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 SVOPLQ8N434 492 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 OR7A2PQ8NGA2 310 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 ZNF689Q96CS4 500 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 CCDC115Q96NT0 180 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 CLPBQ9H078 707 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 RC3H2Q9HBD1 1191 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 CXXC1Q9P0U4 656 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 SLCO3A1Q9UIG8 710 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 ZNF490Q9ULM2 529 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 DHRS7Q9Y394 339 aa13.71□□□□□ -0.21
CCHCR1-203ENST00000396268 NDUFS2O75306 463 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 PRAMEF12O95522 483 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 DCTP40126 519 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 SGSHP51688 502 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 CDH4P55283 916 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 KIAA0040Q15053 153 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 SPRED2Q7Z698 418 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 ANKRD46Q86W74 232 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 MSRB3Q8IXL7 192 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 RPL3LQ92901 407 aaKnown RBP13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 FKBP10Q96AY3 582 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 FAM120BQ96EK7 910 aaKnown RBP13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 BOCQ9BWV1 1114 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 IL37Q9NZH6 218 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 OPTCQ9UBM4 332 aa13.71□□□□□ -0.22
CCHCR1-203ENST00000396268 ANKRD36A6QL64 1941 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 PTPRSQ13332 1948 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 MITFO75030 526 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 CREG1O75629 220 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 DLGAP3O95886 979 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 IRF1P10914 325 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 PFKLP17858 780 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 FMO3P31513 532 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 GNPDA1P46926 289 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 ISL1P61371 349 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 GTF2H3Q13889 308 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 SIM2Q14190 667 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 ANKRD13BQ86YJ7 626 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 MICU2Q8IYU8 434 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 SH3GL1Q99961 368 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 PAK1IP1Q9NWT1 392 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 ELOVL2Q9NXB9 296 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 TMEM98Q9Y2Y6 226 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 BCKDKO14874 412 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 SCELO95171 688 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 GJB5O95377 273 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 ALPIP09923 528 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 PSMB9P28065 219 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 ATP5C1P36542 298 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 GP2P55259 537 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 ADPRMQ3LIE5 342 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 RNF219Q5W0B1 726 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 LAIR2Q6ISS4 152 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 STK40Q8N2I9 435 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 OR5K1Q8NHB7 308 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 NETO1Q8TDF5 533 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 C17orf50Q8WW18 174 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 MUL1Q969V5 352 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 ITPKCQ96DU7 683 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 LRTM1Q9HBL6 345 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 LATS2Q9NRM7 1088 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 SLC6A13Q9NSD5 602 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 ENPP5Q9UJA9 477 aa13.7□□□□□ -0.22
CCHCR1-203ENST00000396268 GOLGA8CPA6NN73 597 aa13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 SLC38A8A6NNN8 435 aa13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 ANGPTL1O95841 491 aa13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 MYCLP1P12525 358 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 RAPSNQ13702 412 aa13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 SUSD1Q6UWL2 747 aa13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 RGL4Q8IZJ4 473 aa13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 TTC30BQ8N4P2 665 aa13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 PJA1Q8NG27 643 aa13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 RHBDF1Q96CC6 855 aa13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 FAM126AQ9BYI3 521 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 RIBC2Q9H4K1 309 aa13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 GKN1Q9NS71 199 aa13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 DNMT3LQ9UJW3 386 aa13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 SPTBN5Q9NRC6 3674 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 ZNF99A8MXY4 864 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-203ENST00000396268 MYO1GB0I1T2 1018 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms