RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ZNF197O14709 1029 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 DEAF1O75398 565 aaPredicted RBP16.33■□□□□ 0.21
NUP50-202ENST00000396096 SOX11P35716 441 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 RPS9P46781 194 aaKnown RBP16.33■□□□□ 0.21
NUP50-202ENST00000396096 ALDH3B2P48448 385 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 NRIP1P48552 1158 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 PLIN5Q00G26 463 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 DHCR24Q15392 516 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 PYCR3Q53H96 274 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 CWF19L1Q69YN2 538 aaKnown RBP16.33■□□□□ 0.21
NUP50-202ENST00000396096 FBXO46Q6PJ61 603 aaPredicted RBP16.33■□□□□ 0.21
NUP50-202ENST00000396096 RBM44Q6ZP01 1051 aaKnown RBP16.33■□□□□ 0.21
NUP50-202ENST00000396096 OR10A6Q8NH74 314 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 POP5Q969H6 163 aaKnown RBP16.33■□□□□ 0.21
NUP50-202ENST00000396096 GLYATL1Q969I3 302 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 PYCR2Q96C36 320 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 CPPED1Q9BRF8 314 aaPredicted RBP16.33■□□□□ 0.21
NUP50-202ENST00000396096 THUMPD3Q9BV44 507 aaKnown RBP16.33■□□□□ 0.21
NUP50-202ENST00000396096 UGT2B28Q9BY64 529 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 NTN4Q9HB63 628 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 TUBA8Q9NY65 449 aaPredicted RBP16.33■□□□□ 0.21
NUP50-202ENST00000396096 DMTF1Q9Y222 760 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 ELOVL7A1L3X0 281 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 ARHGEF33A8MVX0 844 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 UPK1AO00322 258 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 CEBPBP17676 345 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 AMD1P17707 334 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 SDC1P18827 310 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 XPAP23025 273 aaPredicted RBP16.33■□□□□ 0.2
NUP50-202ENST00000396096 S100A3P33764 101 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 MAPK9P45984 424 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 PRLHRP49683 370 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 GZMMP51124 257 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 NEK2P51955 445 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 CHRNB3Q05901 458 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 CSTF3Q12996 717 aaKnown RBP16.33■□□□□ 0.2
NUP50-202ENST00000396096 CHIT1Q13231 466 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 LIPIQ6XZB0 460 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 GRASPQ7Z6J2 395 aaPredicted RBP16.33■□□□□ 0.2
NUP50-202ENST00000396096 ALDH16A1Q8IZ83 802 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 CLHC1Q8NHS4 586 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 ATL1Q8WXF7 558 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 ITCHQ96J02 903 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 KAT8Q9H7Z6 458 aaKnown RBP16.33■□□□□ 0.2
NUP50-202ENST00000396096 RMND5AQ9H871 391 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 CAAP1Q9H8G2 361 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 VCX3AQ9NNX9 186 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 RWDD3Q9Y3V2 267 aa16.33■□□□□ 0.2
NUP50-202ENST00000396096 SLC5A10A0PJK1 596 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 GSTA4O15217 222 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 HOXC11O43248 304 aaPredicted RBP16.32■□□□□ 0.2
NUP50-202ENST00000396096 ATG13O75143 517 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 BMP10O95393 424 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 CYP17A1P05093 508 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 ITPKAP23677 461 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 PTPN6P29350 595 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 CAPGP40121 348 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 DGKGP49619 791 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 LSAMPQ13449 338 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 SLC44A4Q53GD3 710 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 TMEM240Q5SV17 173 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 CYP2U1Q7Z449 544 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 MICU2Q8IYU8 434 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 CELF5Q8N6W0 485 aaKnown RBP16.32■□□□□ 0.2
NUP50-202ENST00000396096 RASGEF1AQ8N9B8 481 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 CSGALNACT1Q8TDX6 532 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 APIPQ96GX9 242 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 CCDC138Q96M89 665 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 PTTG2Q9NZH5 202 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 PPT2Q9UMR5 302 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 SLC27A6Q9Y2P4 619 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 PCDHB14Q9Y5E9 798 aa16.32■□□□□ 0.2
NUP50-202ENST00000396096 OR2AG2A6NM03 316 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 PRMT3O60678 531 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 RETP07949 1114 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 GNAO1P09471 354 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 HOXB6P17509 224 aaKnown RBP16.31■□□□□ 0.2
NUP50-202ENST00000396096 IL1RNP18510 177 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 WEE1P30291 646 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 HALP42357 657 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 FPGSQ05932 587 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 MTAPQ13126 283 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 CYBRD1Q53TN4 286 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.31■□□□□ 0.2
NUP50-202ENST00000396096 ERAP2Q6P179 960 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 USP51Q70EK9 711 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 DHRSXQ8N5I4 330 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 ZFP28Q8NHY6 868 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 WDR20Q8TBZ3 569 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 FIG4Q92562 907 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 ZNF707Q96C28 371 aaPredicted RBP16.31■□□□□ 0.2
NUP50-202ENST00000396096 METTL2AQ96IZ6 378 aaKnown RBP16.31■□□□□ 0.2
NUP50-202ENST00000396096 VPS50Q96JG6 964 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 CCM2Q9BSQ5 444 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 ATG10Q9H0Y0 220 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 MTG2Q9H4K7 406 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 EPHX3Q9H6B9 360 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 INVSQ9Y283 1065 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 FADS3Q9Y5Q0 445 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 TMEM202A6NGA9 273 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms