RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PM20D2Q8IYS1 436 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 SPAG16Q8N0X2 631 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 SPATA4Q8NEY3 305 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 OR52L2PQ8NGH6 319 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 TP53INP1Q96A56 240 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 MOB3AQ96BX8 217 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 ANKRD27Q96NW4 1050 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 CCDC3Q9BQI4 270 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 WNT5BQ9H1J7 359 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 SEMA6AQ9H2E6 1030 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 ACTR5Q9H9F9 607 aaPredicted RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 CYP3A43Q9HB55 503 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 KLC4Q9NSK0 619 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 FAM120CQ9NX05 1096 aaKnown RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 PTGFRNQ9P2B2 879 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 CD300AQ9UGN4 299 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 MAP3K2Q9Y2U5 619 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 FKBP7Q9Y680 259 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 SETD1AO15047 1707 aaKnown RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 BRD4O60885 1362 aaPredicted RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 LNP1A1A4G5 178 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 KPNA7A9QM74 516 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 WNT10BO00744 389 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 YKT6O15498 198 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 ENSAO43768 121 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 HLA-DQA2P01906 255 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 DDX5P17844 614 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 HOXA10P31260 410 aaPredicted RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 CAPGP40121 348 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 WDR5P61964 334 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 RPP38P78345 283 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 ARHGAP19Q14CB8 494 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 DECR1Q16698 335 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 TMEM41BQ5BJD5 291 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 CXorf66Q5JRM2 361 aaPredicted RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 FNBP1LQ5T0N5 605 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 VWA5B1Q5TIE3 1220 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 ACSM6Q6P461 480 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 LARP4Q71RC2 724 aaKnown RBP eCLIP3.45□□□□□ -1.86
XRN1-202ENST00000392981 KATNAL2Q8IYT4 538 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 B4GALNT2Q8NHY0 566 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 FAM110DQ8TAY7 271 aaPredicted RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 OPTNQ96CV9 577 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 DCAF5Q96JK2 942 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 C1orf123Q9NWV4 160 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 KLHL28Q9NXS3 571 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 PDP1Q9P0J1 537 aaPredicted RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 CDH9Q9ULB4 789 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 TMED3Q9Y3Q3 217 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 CHTOPQ9Y3Y2 248 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 KDM6BO15054 1643 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 LOC105369274A0A096LPK9 316 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 LOC102723532A0A0G2JNH3 316 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 A0A1B0GVM2 712 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 M0QZQ0 153 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 SSX4O60224 188 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 KRT33AO76009 404 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 PRNPP04156 253 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 LYNP07948 512 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 ZGLP1P0C6A0 271 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 SRFP11831 508 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 CD1BP29016 333 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 TPMTP51580 245 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 HHEXQ03014 270 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 PRKAA1Q13131 559 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 CTU2Q2VPK5 515 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 IL23RQ5VWK5 629 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 KCTD11Q693B1 232 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 NOTUMQ6P988 496 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 MPZL3Q6UWV2 235 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 C17orf99Q6UX52 265 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 SLC51AQ86UW1 340 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 OR4N4Q8N0Y3 316 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 SHISA5Q8N114 240 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 RNF10Q8N5U6 811 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.45□□□□□ -1.86
XRN1-202ENST00000392981 SETD9Q8NE22 299 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 OR52B4Q8NGK2 314 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 SEMA4DQ92854 862 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 FKBP10Q96AY3 582 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 CPNE1Q99829 537 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 TKTL2Q9H0I9 626 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 C8orf33Q9H7E9 229 aaPredicted RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 ANKZF1Q9H8Y5 726 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 NEK6Q9HC98 313 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 TRIM36Q9NQ86 728 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 DYRK4Q9NR20 520 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 WWOXQ9NZC7 414 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 VPS54Q9P1Q0 977 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 VPS51Q9UID3 782 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 RNF24Q9Y225 148 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 ATG4BQ9Y4P1 393 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 KANSL1LA0AUZ9 987 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 METTL21EPA6NDL7 271 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 MFSD2BA6NFX1 497 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 SDR42E2A6NKP2 422 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 PLPP2O43688 288 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 ZNF888P0CJ79 500 aaPredicted RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 ZNF10P21506 573 aaPredicted RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 CYP2C18P33260 490 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms