RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 SUCLG1P53597 346 aaKnown RBP-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 HERVK_113P61574 105 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 SORDQ00796 357 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 FOXO1Q12778 655 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 LETM2Q2VYF4 491 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 GARNL3Q5VVW2 1013 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 RINLQ6ZS11 566 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 RASGRP2Q7LDG7 609 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 RPAINQ86UA6 219 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 AMIGO1Q86WK6 493 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 GCSAMQ8N6F7 178 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 C14orf178Q8N769 122 aaPredicted RBP-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 ARIH2OSQ8N7S6 290 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 OR52B6Q8NGF0 335 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 FBXO30Q8TB52 745 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 FOPNLQ96NB1 174 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 EYA3Q99504 573 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 SPAG8Q99932 426 aaPredicted RBP-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 IFIH1Q9BYX4 1025 aaKnown RBP-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 NUF2Q9BZD4 464 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 ASPSCR1Q9BZE9 553 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 A4GALTQ9NPC4 353 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 HPS4Q9NQG7 708 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 LNPEPQ9UIQ6 1025 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 ITGA11Q9UKX5 1188 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 PNMA8BQ9ULN7 279 aaPredicted RBP-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 PA2G4Q9UQ80 394 aaKnown RBP-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 DDX52Q9Y2R4 599 aaKnown RBP eCLIP-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 HRNRQ86YZ3 2850 aaPredicted RBP-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 IGLV4-69A0A075B6H9 119 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 A0A1W2PRB8 838 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 MED19A0JLT2 244 aaPredicted RBP-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 OR2M5A3KFT3 312 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 E9PI62 339 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 KLK10O43240 276 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 ACSL3O95573 720 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 HEXAP06865 529 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 CSF1P09603 554 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 ACP2P11117 423 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 IGFBP3P17936 291 aaPredicted RBP-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 FUT3P21217 361 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 PEX2P28328 305 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 EPHA8P29322 1005 aaPredicted RBP-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 HOXC9P31274 260 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 RIDAP52758 137 aaKnown RBP-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 NDST2P52849 883 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 PRKCEQ02156 737 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 CDH18Q13634 790 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 SNTB1Q13884 538 aaKnown RBP-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 RAB30Q15771 203 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 ZNF74Q16587 644 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 UPP1Q16831 310 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 TTC22Q5TAA0 569 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 SERTAD4-AS1Q5TG53 156 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 SAXO2Q658L1 398 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 LINGO4Q6UY18 593 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 QSOX2Q6ZRP7 698 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 FAM160B2Q86V87 743 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 GPR137CQ8N3F9 429 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 FSIP1Q8NA03 581 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 RAB40AQ8WXH6 277 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 C11orf52Q96A22 123 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 RNFT2Q96EX2 444 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 MASTLQ96GX5 879 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 TAAR6Q96RI8 345 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 STACQ99469 402 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 RIOK1Q9BRS2 568 aaKnown RBP-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 SLKQ9H2G2 1235 aaPredicted RBP-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 MBNL1Q9NR56 388 aaKnown RBP-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 DAPP1Q9UN19 280 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 TMEM184BQ9Y519 407 aaPredicted RBP-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 RLFQ13129 1914 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 DOCK9Q9BZ29 2069 aa-0.8□□□□□ -2.54
TRAJ53-201ENST00000390485 IL16Q14005 1332 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 MED13Q9UHV7 2174 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 A0A1B0GW55 424 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 TRUB2O95900 331 aaKnown RBP-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 HRGP04196 525 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 DUX4L2P0CJ85 424 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 DUX4L3P0CJ86 424 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 DUX4L5P0CJ88 424 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 DUX4L6P0CJ89 424 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 DUX4L7P0CJ90 424 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 CGB7P0DN87 165 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 EDNRAP25101 427 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 SERPINA4P29622 427 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 ERVK-16P61578 105 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 PRKAA1Q13131 559 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 LINC00483Q53H64 154 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 C5orf47Q569G3 176 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 AGAP6Q5VW22 663 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 CPLX2Q6PUV4 134 aaKnown RBP-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 DUX4L9Q6RFH8 374 aaPredicted RBP-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 LEKR1Q6ZMV7 388 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 BBS12Q6ZW61 710 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 TMEM135Q86UB9 458 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 CARM1Q86X55 608 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 ERI1Q8IV48 349 aaKnown RBP-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 ZNF695Q8IW36 515 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 CNTROBQ8N137 903 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms