RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 CLTAP09496 248 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 H2BFMP0C1H6 154 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 MYBL2P10244 700 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 PCP11498 1178 aaKnown RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 LHCGRP22888 699 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 WARSP23381 471 aaKnown RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 HLA-FP30511 346 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 RNASE4P34096 147 aaKnown RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 FAM3BP58499 235 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 HAND2P61296 217 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZBED6P86452 979 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 CDK18Q07002 472 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 FOXM1Q08050 763 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 FOXO1Q12778 655 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 CNTN1Q12860 1018 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 RUNX2Q13950 521 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZNF146Q15072 292 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 TPRXLQ17RH7 258 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 GRAMD1BQ3KR37 738 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 SBK1Q52WX2 424 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZNF766Q5HY98 468 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 SPECC1Q5M775 1068 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZNF569Q5MCW4 686 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 ARMC4Q5T2S8 1044 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 C9orf66Q5T8R8 295 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 FAM71E1Q6IPT2 247 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 UNQ9370/PRO34162Q6UXP9 181 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 LHFPL2Q6ZUX7 228 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 SLC46A3Q7Z3Q1 461 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 ADM2Q7Z4H4 148 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 CATIPQ7Z7H3 387 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 SPATS2Q86XZ4 545 aaKnown RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 PTOV1Q86YD1 416 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 SCN4BQ8IWT1 228 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 SAXO1Q8IYX7 474 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 GJC3Q8NFK1 279 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZNF596Q8TC21 504 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 CNRIP1Q96F85 164 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZBED3Q96IU2 234 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZNF75AQ96N20 296 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 FOPNLQ96NB1 174 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 RUNDC3BQ96NL0 473 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 SH3GL2Q99962 352 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 SLX1AQ9BQ83 275 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 CCDC28BQ9BUN5 200 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 TRAIPQ9BWF2 469 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 IFT80Q9P2H3 777 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 P2RX2Q9UBL9 471 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 FBXL5Q9UKA1 691 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 CA14Q9ULX7 337 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 SLC7A7Q9UM01 511 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 MOKQ9UQ07 419 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 FOXA2Q9Y261 457 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 WSB1Q9Y6I7 421 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 STON1Q9Y6Q2 735 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 CMYA5Q8N3K9 4069 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 MIA3Q5JRA6 1907 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 FAM234BA2RU67 622 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 NPIPB13A6NJU9 1138 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 A8MX80 341 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 KLRF2D3W0D1 207 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 J3KTA2 159 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 IRAK2O43187 625 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 GPR39O43194 453 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 SYNJ1O43426 1573 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 DNAJC13O75165 2243 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 PRAMEF12O95522 483 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 CYP4B1P13584 511 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 MT1GP13640 62 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 MAGP20916 626 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 MAGEB1P43366 347 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 MKI67P46013 3256 aaKnown RBP-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 RCAN1P53805 252 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 ARSFP54793 590 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 RIPPLY3P57055 190 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 RUNX1Q01196 453 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 NAAAQ02083 359 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 PCBP2Q15366 365 aaKnown RBP eCLIP-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 IL17AQ16552 155 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 MAPKAPK3Q16644 382 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 SLC45A4Q5BKX6 768 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 NDUFAF5Q5TEU4 345 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZCCHC23Q6ZST2 131 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 C16orf86Q6ZW13 317 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 GALNT7Q86SF2 657 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 HOMER1Q86YM7 354 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 CCDC28AQ8IWP9 274 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 GBGT1Q8N5D6 347 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 POMGNT2Q8NAT1 580 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 PAPD5Q8NDF8 572 aaKnown RBP-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 LILRB4Q8NHJ6 448 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 WDR66Q8TBY9 1149 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 RNF128Q8TEB7 428 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 CANT1Q8WVQ1 401 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 SNAPC3Q92966 411 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 TMBIM1Q969X1 311 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 EXOC4Q96A65 974 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 ORAI1Q96D31 301 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 MRRFQ96E11 262 aaKnown RBP-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZC3HAV1LQ96H79 300 aaKnown RBP-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms