RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 SELENOSQ9BQE4 189 aa15.34■□□□□ 0.05
VCX3A-201ENST00000381089 SOX17Q9H6I2 414 aaPredicted RBP15.34■□□□□ 0.05
VCX3A-201ENST00000381089 IMPACTQ9P2X3 320 aa15.34■□□□□ 0.05
VCX3A-201ENST00000381089 PCDHA3Q9Y5H8 950 aa15.34■□□□□ 0.05
VCX3A-201ENST00000381089 ZGRF1Q86YA3 2104 aa15.34■□□□□ 0.05
VCX3A-201ENST00000381089 PRSS44E7EML9 344 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 ZG16O60844 167 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 SNRNP200O75643 2136 aaKnown RBP15.33■□□□□ 0.04
VCX3A-201ENST00000381089 FKBP9O95302 570 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 STSP08842 583 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 TPBGLP0DKB5 382 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 CD9P21926 228 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 GCGRP47871 477 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 NAP1L1P55209 391 aaKnown RBP15.33■□□□□ 0.04
VCX3A-201ENST00000381089 OCA2Q04671 838 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 MFAP5Q13361 173 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 SF1Q15637 639 aaKnown RBP15.33■□□□□ 0.04
VCX3A-201ENST00000381089 KCTD11Q693B1 232 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 SP5Q6BEB4 398 aaPredicted RBP15.33■□□□□ 0.04
VCX3A-201ENST00000381089 RPUSD3Q6P087 351 aaKnown RBP15.33■□□□□ 0.04
VCX3A-201ENST00000381089 TTC23LQ6PF05 361 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 LINC00523Q86TU6 105 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 FJX1Q86VR8 437 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 DCUN1D3Q8IWE4 304 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 RAB42Q8N4Z0 105 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 ASZ1Q8WWH4 475 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 RAB11FIP5Q9BXF6 653 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 COPG2Q9UBF2 871 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 SLC39A10Q9ULF5 831 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 PCDHA13Q9Y5I0 950 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 FAM169AQ9Y6X4 670 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 CROCCQ5TZA2 2017 aa15.33■□□□□ 0.04
VCX3A-201ENST00000381089 DYTNA2CJ06 578 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 CSE1LP55060 971 aaKnown RBP15.32■□□□□ 0.04
VCX3A-201ENST00000381089 ARG2P78540 354 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 HSPA14Q0VDF9 509 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 UNC5DQ6UXZ4 953 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 NAPRTQ6XQN6 538 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 LINC00696Q6ZRV3 163 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 SHISA6Q6ZSJ9 500 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 NLRP9Q7RTR0 991 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 FAM20CQ8IXL6 584 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 CCDC170Q8IYT3 715 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 SLC22A15Q8IZD6 547 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 OR11G2Q8NGC1 345 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 GSDMBQ8TAX9 411 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 MAGEB10Q96LZ2 347 aaPredicted RBP15.32■□□□□ 0.04
VCX3A-201ENST00000381089 SLX1AQ9BQ83 275 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 CRB3Q9BUF7 120 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 CTSFQ9UBX1 484 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 KLHL20Q9Y2M5 609 aa15.32■□□□□ 0.04
VCX3A-201ENST00000381089 MROH6A6NGR9 719 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 OR51F1A6NGY5 319 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 MAP2K7O14733 419 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 SRPX2O60687 465 aaPredicted RBP15.31■□□□□ 0.04
VCX3A-201ENST00000381089 JRKO75564 520 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 USP1O94782 785 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 HPP00738 406 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 APOA4P06727 396 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 UQCRHP07919 91 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 ACPPP15309 386 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 FOXN2P32314 431 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 CYLC1P35663 651 aaPredicted RBP15.31■□□□□ 0.04
VCX3A-201ENST00000381089 TMED2Q15363 201 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 INAQ16352 499 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 FIGLAQ6QHK4 219 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 AFTPHQ6ULP2 937 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 COX15Q7KZN9 410 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 TAX1BP1Q86VP1 789 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 TMEM151BQ8IW70 566 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 KBTBD2Q8IY47 623 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 C2orf73Q8N5S3 287 aaPredicted RBP15.31■□□□□ 0.04
VCX3A-201ENST00000381089 DNAAF3Q8N9W5 541 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 FAM71DQ8N9W8 422 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 LINC01555Q8NAE3 123 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 OR1N1Q8NGS0 311 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 OR2L8Q8NGY9 312 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 CFAP61Q8NHU2 1237 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 ZUFSPQ96AP4 578 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 SUCOQ9UBS9 1254 aaKnown RBP15.31■□□□□ 0.04
VCX3A-201ENST00000381089 ZNF282Q9UDV7 671 aaPredicted RBP15.31■□□□□ 0.04
VCX3A-201ENST00000381089 MRFAP1Q9Y605 127 aa15.31■□□□□ 0.04
VCX3A-201ENST00000381089 CCDC162PA2VCL2 907 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 FITM1A5D6W6 292 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 VSTM2BA6NLU5 285 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 TARM1B6A8C7 271 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 IPO7O95373 1038 aaKnown RBP15.3■□□□□ 0.04
VCX3A-201ENST00000381089 FDXRP22570 491 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 MCM3P25205 808 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 PSMA3P25788 255 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 GRIA3P42263 894 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 OR1D4P47884 311 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 CDH17Q12864 832 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 PRMT9Q6P2P2 845 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 MCEMP1Q8IX19 187 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 METTL27Q8N6F8 245 aaPredicted RBP15.3■□□□□ 0.04
VCX3A-201ENST00000381089 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.3■□□□□ 0.04
VCX3A-201ENST00000381089 MIEF2Q96C03 454 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 PANX2Q96RD6 677 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 ZNF160Q9HCG1 818 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms