RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 EPHX1P07099 455 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 PIM1P11309 404 aaPredicted RBP18.69■□□□□ 0.58
GMDS-201ENST00000380805 BCKDHAP12694 445 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 ITPKAP23677 461 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 IMPA1P29218 277 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 CASP2P42575 452 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 CLDN8P56748 225 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 LIPEQ05469 1076 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 CHIT1Q13231 466 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 SGO1Q5FBB7 561 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 EGFLAMQ63HQ2 1017 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 ADAMTSL4Q6UY14 1074 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 CYP2R1Q6VVX0 501 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 YAF2Q8IY57 180 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 CXorf40AQ8TE69 158 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 METTL2AQ96IZ6 378 aaKnown RBP18.69■□□□□ 0.58
GMDS-201ENST00000380805 DPY30Q9C005 99 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 GPRC5BQ9NZH0 403 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 ATXN10Q9UBB4 475 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 SNX13Q9Y5W8 968 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 KRT87PA6NCN2 255 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 H0YIV9 168 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 C1orf105O95561 183 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 CD22P20273 847 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 MAPK1P28482 360 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 PDHA2P29803 388 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 DRD3P35462 400 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 HNF4AP41235 474 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 GRIA3P42263 894 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 CNTN1Q12860 1018 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 GRM2Q14416 872 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 AGERQ15109 404 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 GRHL2Q6ISB3 625 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 ZNF547Q8IVP9 402 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 ICA1LQ8NDH6 482 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 ST13P5Q8NFI4 369 aaPredicted RBP18.69■□□□□ 0.58
GMDS-201ENST00000380805 DNAJB8Q8NHS0 232 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 WDR20Q8TBZ3 569 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 GTF2H4Q92759 462 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 PKP4Q99569 1192 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 CGREF1Q99674 301 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 RSPH9Q9H1X1 276 aaPredicted RBP18.69■□□□□ 0.58
GMDS-201ENST00000380805 OR2AG1Q9H205 316 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 DPEP2Q9H4A9 486 aa18.69■□□□□ 0.58
GMDS-201ENST00000380805 COL6A3P12111 3177 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 C5orf42Q9H799 3197 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 SLC16A8O95907 504 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 GPIP06744 558 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 HSD3B1P14060 373 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 HSD3B2P26439 372 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 BDKRB1P46663 353 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 HNRNPFP52597 415 aaKnown RBP18.68■□□□□ 0.58
GMDS-201ENST00000380805 DGKQP52824 942 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 RPS14P62263 151 aaKnown RBP18.68■□□□□ 0.58
GMDS-201ENST00000380805 IRF8Q02556 426 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 CAMK2GQ13555 558 aaPredicted RBP18.68■□□□□ 0.58
GMDS-201ENST00000380805 INPP5AQ14642 412 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 CCDC85BQ15834 202 aaPredicted RBP18.68■□□□□ 0.58
GMDS-201ENST00000380805 CCSMST1Q4G0I0 132 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 OR2L2Q8NH16 312 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 HM13Q8TCT9 377 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 OR4K3Q96R72 315 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 KCTD14Q9BQ13 255 aaPredicted RBP18.68■□□□□ 0.58
GMDS-201ENST00000380805 STON1Q9Y6Q2 735 aa18.68■□□□□ 0.58
GMDS-201ENST00000380805 TCRBV5S2A0A599 114 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 MAGEA13PA6NCF6 341 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 KCNH1O95259 989 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 APODP05090 189 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 PGRP06401 933 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 HALP42357 657 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 GTF2H3Q13889 308 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 AAK1Q2M2I8 961 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 ITPRIPL2Q3MIP1 535 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 FAM174BQ3ZCQ3 159 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 AASDHQ4L235 1098 aaPredicted RBP18.67■□□□□ 0.58
GMDS-201ENST00000380805 NUDT18Q6ZVK8 323 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 C11orf96Q7Z7L8 435 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 TRIM74Q86UV6 250 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 TRAPPC5Q8IUR0 188 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 CANT1Q8WVQ1 401 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 TESCQ96BS2 214 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 HIC2Q96JB3 615 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 TMEM74Q96NL1 305 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 SPATA6Q9NWH7 488 aaPredicted RBP18.67■□□□□ 0.58
GMDS-201ENST00000380805 MAN2B2Q9Y2E5 1009 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 DLGAP4Q9Y2H0 992 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 PCDHB3Q9Y5E6 796 aa18.67■□□□□ 0.58
GMDS-201ENST00000380805 TRBV5-3A0A0A0MS03 114 aa18.66■□□□□ 0.58
GMDS-201ENST00000380805 DHRS12A0PJE2 317 aa18.66■□□□□ 0.58
GMDS-201ENST00000380805 ANTXRLA6NF34 631 aa18.66■□□□□ 0.58
GMDS-201ENST00000380805 A6NHS1 94 aa18.66■□□□□ 0.58
GMDS-201ENST00000380805 DENRO43583 198 aaKnown RBP18.66■□□□□ 0.58
GMDS-201ENST00000380805 LAMP2P13473 410 aa18.66■□□□□ 0.58
GMDS-201ENST00000380805 AMD1P17707 334 aa18.66■□□□□ 0.58
GMDS-201ENST00000380805 NAE1Q13564 534 aa18.66■□□□□ 0.58
GMDS-201ENST00000380805 SLC44A4Q53GD3 710 aa18.66■□□□□ 0.58
GMDS-201ENST00000380805 SPANXN4Q5MJ08 99 aa18.66■□□□□ 0.58
GMDS-201ENST00000380805 ATAT1Q5SQI0 421 aa18.66■□□□□ 0.58
GMDS-201ENST00000380805 AGBL4Q5VU57 503 aa18.66■□□□□ 0.58
GMDS-201ENST00000380805 MSANTD1Q6ZTZ1 278 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms