RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 ATP8B1O43520 1251 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 DUX1O43812 170 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 PRICKLE3O43900 615 aaPredicted RBP18.17■□□□□ 0.5
SMN2-202ENST00000380742 KLK8O60259 260 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 PPM1FP49593 454 aaPredicted RBP18.17■□□□□ 0.5
SMN2-202ENST00000380742 ILKQ13418 452 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 CCDC153Q494R4 210 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 FBXO48Q5FWF7 155 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 SULT1C3Q6IMI6 304 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 KLHL35Q6PF15 583 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 SUSD1Q6UWL2 747 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 TMPRSS9Q7Z410 1059 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 GOLGA6L1Q8N7Z2 621 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 FLVCR1-AS1Q8TAF5 88 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 ATL1Q8WXF7 558 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 NCSTNQ92542 709 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 NUDT22Q9BRQ3 303 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 TMEM79Q9BSE2 394 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 IQCGQ9H095 443 aaKnown RBP18.17■□□□□ 0.5
SMN2-202ENST00000380742 SYNDIG1Q9H7V2 258 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 PTBP2Q9UKA9 531 aaKnown RBP18.17■□□□□ 0.5
SMN2-202ENST00000380742 PCDHGA1Q9Y5H4 931 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 PIPSLA2A3N6 862 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 GSAPA4D1B5 854 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 ZNF839A8K0R7 811 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 DKK1O94907 266 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 S100BP04271 92 aaPredicted RBP18.17■□□□□ 0.5
SMN2-202ENST00000380742 HOXB3P14651 431 aaPredicted RBP18.17■□□□□ 0.5
SMN2-202ENST00000380742 RPA3P35244 121 aaPredicted RBP18.17■□□□□ 0.5
SMN2-202ENST00000380742 HNMTP50135 292 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 NOVA1P51513 510 aaKnown RBP18.17■□□□□ 0.5
SMN2-202ENST00000380742 GFERP55789 205 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 TBPL1P62380 186 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 NAE1Q13564 534 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 MPP2Q14168 576 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 PFKFB4Q16877 469 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 OR56A3Q8NH54 315 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 SMPDL3AQ92484 453 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 ESAMQ96AP7 390 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 PYCR2Q96C36 320 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 FAM111AQ96PZ2 611 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 RTKNQ9BST9 563 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 RAB33BQ9H082 229 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 ABCG4Q9H172 646 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 ACTR10Q9NZ32 417 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 TMEM9Q9P0T7 183 aa18.17■□□□□ 0.5
SMN2-202ENST00000380742 HEATR5BQ9P2D3 2071 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 C2orf74A8MZ97 194 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 ISM1B1AKI9 464 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 G3V2L1 256 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 CAPN5O15484 640 aaPredicted RBP18.16■□□□□ 0.5
SMN2-202ENST00000380742 PRPF4O43172 522 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMN2-202ENST00000380742 DLX3O60479 287 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 SMIM24O75264 130 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 KCNK5O95279 499 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 CPNE6O95741 557 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 FTH1P19P0C7X4 201 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 GFAPP14136 432 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 PSMB5P28074 263 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 GGT5P36269 586 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 GDF5P43026 501 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 SLC6A12P48065 614 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 AGTR2P50052 363 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 SIM1P81133 766 aaPredicted RBP18.16■□□□□ 0.5
SMN2-202ENST00000380742 E2F1Q01094 437 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 PRKAA1Q13131 559 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 TSTA3Q13630 321 aaPredicted RBP18.16■□□□□ 0.5
SMN2-202ENST00000380742 KIR2DS3Q14952 304 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 PTCHD3Q3KNS1 767 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 ARMC6Q6NXE6 501 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 WDR74Q6RFH5 385 aaPredicted RBP18.16■□□□□ 0.5
SMN2-202ENST00000380742 ZNF574Q6ZN55 896 aaPredicted RBP18.16■□□□□ 0.5
SMN2-202ENST00000380742 TCAIMQ8N3R3 496 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 FBXO39Q8N4B4 442 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 ARMC2Q8NEN0 867 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 MED8Q96G25 268 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 PKNOX2Q96KN3 472 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 OR2A14Q96R47 310 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 GFM1Q96RP9 751 aaKnown RBP18.16■□□□□ 0.5
SMN2-202ENST00000380742 SGPP1Q9BX95 441 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 KCNK9Q9NPC2 374 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 ABCF3Q9NUQ8 709 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 INTS7Q9NVH2 962 aaKnown RBP18.16■□□□□ 0.5
SMN2-202ENST00000380742 WWOXQ9NZC7 414 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 EPHA6Q9UF33 1036 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 ASB1Q9Y576 335 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 ENTPD2Q9Y5L3 495 aa18.16■□□□□ 0.5
SMN2-202ENST00000380742 PTPRBP23467 1997 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 ADAMTS20P59510 1910 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 A8MT66 165 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 UGT2B7P16662 529 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 SDHBP21912 280 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 OAS2P29728 719 aaKnown RBP18.15■□□□□ 0.5
SMN2-202ENST00000380742 PRDX3P30048 256 aaKnown RBP18.15■□□□□ 0.5
SMN2-202ENST00000380742 HSPA7P48741 367 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 ALDH18A1P54886 795 aaKnown RBP18.15■□□□□ 0.5
SMN2-202ENST00000380742 YBX1P67809 324 aaKnown RBP18.15■□□□□ 0.5
SMN2-202ENST00000380742 INSM1Q01101 510 aaPredicted RBP18.15■□□□□ 0.5
SMN2-202ENST00000380742 SETDB1Q15047 1291 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 IRGCQ6NXR0 463 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms