RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SLC30A4O14863 429 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 HRO43593 1189 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 TRIM3O75382 744 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 CSF2P04141 144 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 LCKP06239 509 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 HSD17B1P14061 328 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 LIPAP38571 399 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 POU3F4P49335 361 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 RAB13P51153 203 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SLC35A2P78381 396 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 KCNAB2Q13303 367 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 TAF1CQ15572 869 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SYT16Q17RD7 645 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 ZC3H12BQ5HYM0 836 aaKnown RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 CMC1Q7Z7K0 106 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 GDPD1Q8N9F7 314 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 ANKRD52Q8NB46 1076 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 OR9I1Q8NGQ6 314 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 ASB15Q8WXK1 588 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 TMBIM1Q969X1 311 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 C19orf60Q96EN9 201 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 MRPL48Q96GC5 212 aaKnown RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 ZSWIM3Q96MP5 696 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 NT5C1AQ9BXI3 368 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 NUSAP1Q9BXS6 441 aaKnown RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 CEP41Q9BYV8 373 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 REG4Q9BYZ8 158 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 GPR63Q9BZJ6 419 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SLC22A4Q9H015 551 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 RAB6BQ9NRW1 208 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 MTMR10Q9NXD2 777 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 ACTR10Q9NZ32 417 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 KCMF1Q9P0J7 381 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 VTI1BQ9UEU0 232 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SLC6A14Q9UN76 642 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 A0A1B0GWJ7 208 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 OR2A25A4D2G3 310 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 KPNA7A9QM74 516 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 DNASE2O00115 360 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 CLN5O75503 358 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 TSPAN12O95859 305 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 GADD45AP24522 165 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 PIK3CBP42338 1070 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 EEF1A1P68104 462 aaKnown RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 DAB2P98082 770 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 EEF1A2Q05639 463 aaKnown RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 CDK5R2Q13319 367 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 ZBTB6Q15916 424 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 FSCN1Q16658 493 aaKnown RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 TATDN3Q17R31 274 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 TRIM60Q495X7 471 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 HSD17B12Q53GQ0 312 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SOWAHCQ53LP3 525 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 TOR1AIP1Q5JTV8 583 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 EEF1A1P5Q5VTE0 462 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 ANKRD34AQ69YU3 496 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 LAIR1Q6GTX8 287 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SCARA5Q6ZMJ2 495 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 OR5B17Q8NGF7 314 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 MYDGFQ969H8 173 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 COQ8BQ96D53 544 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 VPS39Q96JC1 886 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SEPHS2Q99611 448 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 DUSP21Q9H596 190 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SMURF2Q9HAU4 748 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 IL1RL2Q9HB29 575 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 ARNT2Q9HBZ2 717 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 USE1Q9NZ43 259 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 AKT3Q9Y243 479 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 V9GYQ6 96 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 TRABD2BA6NFA1 517 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 SGCEO43556 437 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 PCDHGA12O60330 932 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 HUS1O60921 280 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 ADAMTS4O75173 837 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 TPOP07202 933 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 NCK1P16333 377 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 CHRM3P20309 590 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 FMO3P31513 532 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 GRK5P34947 590 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 KIR2DL3P43628 341 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 OGDHQ02218 1023 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 PRKAA1Q13131 559 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 SV2CQ496J9 727 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 GPR33Q49SQ1 333 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 DARS2Q6PI48 645 aaKnown RBP7.3□□□□□ -1.24
CDKL5-201ENST00000379989 STX12Q86Y82 276 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 TOP6BLQ8N6T0 577 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 ZNF555Q8NEP9 628 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 SLC38A4Q969I6 547 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 ISL2Q96A47 359 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 TRMT2BQ96GJ1 504 aaKnown RBP7.3□□□□□ -1.24
CDKL5-201ENST00000379989 PDLIM5Q96HC4 596 aaKnown RBP7.3□□□□□ -1.24
CDKL5-201ENST00000379989 CELF6Q96J87 481 aaKnown RBP7.3□□□□□ -1.24
CDKL5-201ENST00000379989 ARL5BQ96KC2 179 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 MOGAT1Q96PD6 335 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 EBNA1BP2Q99848 306 aaKnown RBP7.3□□□□□ -1.24
CDKL5-201ENST00000379989 SLC25A23Q9BV35 468 aa7.3□□□□□ -1.24
CDKL5-201ENST00000379989 C11orf54Q9H0W9 315 aaPredicted RBP7.3□□□□□ -1.24
CDKL5-201ENST00000379989 SLAMF7Q9NQ25 335 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms