RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 MPOP05164 745 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 LTA4HP09960 611 aaKnown RBP18.09■□□□□ 0.49
SSU72-203ENST00000378725 FGF3P11487 239 aaPredicted RBP18.09■□□□□ 0.49
SSU72-203ENST00000378725 CCL4P13236 92 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 CDH3P22223 829 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 OAS2P29728 719 aaKnown RBP18.09■□□□□ 0.49
SSU72-203ENST00000378725 GMPRP36959 345 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 TSPAN7P41732 249 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 GABREP78334 506 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 CDKL1Q00532 357 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 FBXO38Q6PIJ6 1188 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 ADAMTSL2Q86TH1 951 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 ISCA2Q86U28 154 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 CENPLQ8N0S6 344 aaPredicted RBP18.09■□□□□ 0.49
SSU72-203ENST00000378725 D2HGDHQ8N465 521 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 OR2A1Q8NGT9 310 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 FBXL8Q96CD0 374 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 SLC46A1Q96NT5 459 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 TRAPPC9Q96Q05 1148 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 NMRAL1Q9HBL8 299 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 OCIAD1Q9NX40 245 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 SIDT1Q9NXL6 827 aaKnown RBP18.09■□□□□ 0.49
SSU72-203ENST00000378725 ARL15Q9NXU5 204 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 A0A0J9YY10 115 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 IQANK1A0A1B0GTG1 560 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 CCDC189A1A4V9 331 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 SLC9B1P1A6NJY1 282 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 EFCAB7A8K855 629 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 KLHL2O95198 593 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 HGFP14210 728 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 ST6GAL1P15907 406 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 MLLT3P42568 568 aaPredicted RBP18.08■□□□□ 0.48
SSU72-203ENST00000378725 SEPHS1P49903 392 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 HSD11B2P80365 405 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 MC2RQ01718 297 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 ZXDCQ2QGD7 858 aaPredicted RBP18.08■□□□□ 0.48
SSU72-203ENST00000378725 TAF1BQ53T94 588 aaPredicted RBP18.08■□□□□ 0.48
SSU72-203ENST00000378725 MBOAT1Q6ZNC8 495 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 SYTL1Q8IYJ3 562 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 LSMEM2Q8N112 164 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 PPFIBP2Q8ND30 876 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 MZB1Q8WU39 189 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 PTERQ96BW5 349 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 NXNL1Q96CM4 212 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 NXPE2Q96DL1 559 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 GPR78Q96P69 363 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 UNKQ9C0B0 810 aaKnown RBP18.08■□□□□ 0.48
SSU72-203ENST00000378725 B3GNT4Q9C0J1 378 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 CHRNA10Q9GZZ6 450 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 FBXO8Q9NRD0 319 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 EURLQ9NYK6 297 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 BTRCQ9Y297 605 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 PCDHB11Q9Y5F2 797 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 KLK4Q9Y5K2 254 aa18.08■□□□□ 0.48
SSU72-203ENST00000378725 AGRPO00253 132 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 RFPL1O75677 317 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 JMJD7P0C870 316 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 COL6A2P12110 1019 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 ITIH1P19827 911 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 ETV5P41161 510 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 KCNC1P48547 511 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 IRF9Q00978 393 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 OR4D1Q15615 310 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 SF1Q15637 639 aaKnown RBP18.07■□□□□ 0.48
SSU72-203ENST00000378725 FAM83EQ2M2I3 478 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 CDKL4Q5MAI5 379 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 AGTRAPQ6RW13 159 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 SUSD1Q6UWL2 747 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 TRIM73Q86UV7 250 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 TAX1BP1Q86VP1 789 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 OR56A3Q8NH54 315 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 STAG3L4Q8TBR4 150 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 KCTD4Q8WVF5 259 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 ATL1Q8WXF7 558 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 VPS11Q9H270 941 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 PISDQ9UG56 409 aa18.07■□□□□ 0.48
SSU72-203ENST00000378725 PABPN1LA6NDY0 278 aaKnown RBP18.06■□□□□ 0.48
SSU72-203ENST00000378725 TNFSF15O95150 251 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 GUCA1CO95843 209 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 CAPNS1P04632 268 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 ANXA5P08758 320 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 PVRP15151 417 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 FOLR1P15328 257 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 TFEBP19484 476 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 ACAP2Q15057 778 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 TGFBIQ15582 683 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 ZIC1Q15915 447 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 KIAA1614Q5VZ46 1190 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 GPSM1Q86YR5 675 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 FAM20CQ8IXL6 584 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 OR2L3Q8NG85 312 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 OR2W6PQ8NHA6 318 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 RHEBL1Q8TAI7 183 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 ZUFSPQ96AP4 578 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 TCTN2Q96GX1 697 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 CABS1Q96KC9 395 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 TAAR9Q96RI9 348 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 SGPP1Q9BX95 441 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 ASCL3Q9NQ33 180 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 UTP6Q9NYH9 597 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms