RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 FAM193BQ96PV7 902 aaPredicted RBP11.53□□□□□ -0.56
NPHP4-202ENST00000378161 PORCNQ9H237 461 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 MROH8Q9H579 483 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 TJP2Q9UDY2 1190 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 CD300AQ9UGN4 299 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 PCOLCE2Q9UKZ9 415 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 DUSP12Q9UNI6 340 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 PCDHGA9Q9Y5G4 932 aaKnown RBP11.53□□□□□ -0.56
NPHP4-202ENST00000378161 A0A1W2PQ09 198 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 WASHC1A8K0Z3 465 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 MT-ND2P03891 347 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 HMGCRP04035 888 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 RAF1P04049 648 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 PSMA1P25786 263 aaKnown RBP11.52□□□□□ -0.56
NPHP4-202ENST00000378161 PTX3P26022 381 aaPredicted RBP11.52□□□□□ -0.56
NPHP4-202ENST00000378161 SEC23BQ15437 767 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 MAJINQ3KP22 176 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 INO80DQ53TQ3 878 aaPredicted RBP11.52□□□□□ -0.56
NPHP4-202ENST00000378161 CLLU1Q5K131 121 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 PRAMEF18Q5VWM3 479 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 LRRN1Q6UXK5 716 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 ACOT1Q86TX2 421 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 UNC5BQ8IZJ1 945 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 SVOPLQ8N434 492 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 EFHBQ8N7U6 833 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 TMBIM1Q969X1 311 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 TBCDQ9BTW9 1192 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 GPR88Q9GZN0 384 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 TMEM134Q9H6X4 195 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 DTLQ9NZJ0 730 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 NLKQ9UBE8 527 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 IRS2Q9Y4H2 1338 aa11.52□□□□□ -0.56
NPHP4-202ENST00000378161 TULP3O75386 442 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 ANXA6P08133 673 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 STAG3L1P0CL83 205 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 CKBP12277 381 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 IGFBP5P24593 272 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 CDKN2CP42773 168 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 KRT33BQ14525 404 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 ANKS3Q6ZW76 656 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 NT5DC4Q86YG4 428 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 PLD5Q8N7P1 536 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 UXS1Q8NBZ7 420 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 OR5T3Q8NGG3 340 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 C2CD4CQ8TF44 421 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 GAREM1Q9H706 876 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 MAGEL2Q9UJ55 1249 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 GSTK1Q9Y2Q3 226 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 MYH4Q9Y623 1939 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 OR14I1A6ND48 311 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 PMM2O15305 246 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 OR56A5P0C7T3 313 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 EDN3P14138 238 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 CBR1P16152 277 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 CDH17Q12864 832 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 PSMD5Q16401 504 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 LETMD1Q6P1Q0 360 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 POMZP3Q6PJE2 187 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 FAM198BQ6UWH4 519 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 PGAP1Q75T13 922 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 COLGALT1Q8NBJ5 622 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 OR7D4Q8NG98 312 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 THAP6Q8TBB0 222 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 UTP15Q8TED0 518 aaKnown RBP11.52□□□□□ -0.57
NPHP4-202ENST00000378161 MYEF2Q9P2K5 600 aaKnown RBP11.52□□□□□ -0.57
NPHP4-202ENST00000378161 SCN11AQ9UI33 1791 aa11.52□□□□□ -0.57
NPHP4-202ENST00000378161 NRP1O14786 923 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 ADRB1P08588 477 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 CXCL8P10145 99 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 CPN2P22792 545 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 HMGCLP35914 325 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 LAMTOR4Q0VGL1 99 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 MFSD13AQ14CX5 517 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 AADACL4Q5VUY2 407 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 PRAMEF13Q5VWM6 474 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 PAPD4Q6PIY7 484 aaKnown RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 C3P1Q6ZMU1 363 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 PRSS48Q7RTY5 328 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 GALNT5Q7Z7M9 940 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 CFAP206Q8IYR0 622 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 FTMTQ8N4E7 242 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 IL31RAQ8NI17 732 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 FRS2Q8WU20 508 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 ADAMTS14Q8WXS8 1223 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 CHIAQ9BZP6 476 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 WWOXQ9NZC7 414 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 TSPAN16Q9UKR8 245 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 IKZF3Q9UKT9 509 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 FNDC3AQ9Y2H6 1198 aaKnown RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 SLC22A7Q9Y694 548 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 ARPC2O15144 300 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 RP2O75695 350 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 AP2A2O94973 939 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 SSTR2P30874 369 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 BCAT1P54687 386 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 MLLT10P55197 1068 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 PER3P56645 1201 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 SP2Q02086 613 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 GPR17Q13304 367 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms