RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 CHD5Q8TDI0 1954 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 KRT87PA6NCN2 255 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 TBX1O43435 398 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 RGS10O43665 173 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 RECQL5O94762 991 aaPredicted RBP17.55■□□□□ 0.4
GNE-201ENST00000377902 GJB5O95377 273 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 GLUD1P00367 558 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 LIPAP38571 399 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 CREMQ03060 361 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 IL18R1Q13478 541 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 SOWAHCQ53LP3 525 aaPredicted RBP17.55■□□□□ 0.4
GNE-201ENST00000377902 ZC3H12BQ5HYM0 836 aaKnown RBP17.55■□□□□ 0.4
GNE-201ENST00000377902 ATXN7L2Q5T6C5 722 aaPredicted RBP17.55■□□□□ 0.4
GNE-201ENST00000377902 C9orf131Q5VYM1 1079 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 KDM4DQ6B0I6 523 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 OR2T5Q6IEZ7 315 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 SERPINA9Q86WD7 417 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 PSD4Q8NDX1 1056 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 OR52E4Q8NGH9 312 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 OR2T29Q8NH02 315 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 RHOXF1Q8NHV9 184 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 PHF10Q8WUB8 498 aaKnown RBP17.55■□□□□ 0.4
GNE-201ENST00000377902 STARD8Q92502 1023 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 ULK4Q96C45 1275 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 FUBP3Q96I24 572 aaKnown RBP eCLIP17.55■□□□□ 0.4
GNE-201ENST00000377902 DPH2Q9BQC3 489 aaPredicted RBP17.55■□□□□ 0.4
GNE-201ENST00000377902 RNF167Q9H6Y7 350 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 PARVBQ9HBI1 364 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 A0A096LPI6 279 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 EFCAB9A8MZ26 197 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 PCDHGA12O60330 932 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 ACSL4O60488 711 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 CD160O95971 181 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 PDYNP01213 254 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 SPNP16150 400 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 EFNA1P20827 205 aaPredicted RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 CD9P21926 228 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 PSMA3P25788 255 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 C21orf33P30042 268 aaPredicted RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 ARHGEF7Q14155 803 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 SF3B4Q15427 424 aaKnown RBP eCLIP17.54■□□□□ 0.4
GNE-201ENST00000377902 RFX4Q33E94 735 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 CLLU1OSQ5K130 101 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 SNX20Q7Z614 316 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 RTN4RL1Q86UN2 441 aaPredicted RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 SCAIQ8N9R8 606 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 GLB1L3Q8NCI6 653 aaPredicted RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 FAM83FQ8NEG4 500 aaPredicted RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 MCFD2Q8NI22 146 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 ZHX1-C8orf76Q96EF9 292 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 ADGRE3Q9BY15 652 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 GPR63Q9BZJ6 419 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 GKN1Q9NS71 199 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 OLA1Q9NTK5 396 aaKnown RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 IL17CQ9P0M4 197 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 LAMA2P24043 3122 aaKnown RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 SLC28A1O00337 649 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 WBP4O75554 376 aaKnown RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 S100A3P33764 101 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 RPS14P62263 151 aaKnown RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 ARF5P84085 180 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 SEMG2Q02383 582 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 DUSP4Q13115 394 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 MAD2L1BPQ15013 274 aaPredicted RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 BCL2A1Q16548 175 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 CCDC92Q53HC0 331 aaPredicted RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 ZCCHC8Q6NZY4 707 aaKnown RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 RNF19BQ6ZMZ0 732 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 TRIM46Q7Z4K8 759 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 SETD9Q8NE22 299 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 PDLIM5Q96HC4 596 aaKnown RBP17.54■□□□□ 0.4
GNE-201ENST00000377902 OSGIN1Q9UJX0 560 aa17.54■□□□□ 0.4
GNE-201ENST00000377902 VNN2O95498 520 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 KLKB1P03952 638 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 RHOCP08134 193 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 MAGEA2P43356 314 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 RNF219Q5W0B1 726 aaPredicted RBP17.53■□□□□ 0.4
GNE-201ENST00000377902 OR4F3Q6IEY1 312 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 LYSMD2Q8IV50 215 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 ATG16L2Q8NAA4 619 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 FAM126AQ9BYI3 521 aaPredicted RBP17.53■□□□□ 0.4
GNE-201ENST00000377902 C6orf62Q9GZU0 229 aaPredicted RBP17.53■□□□□ 0.4
GNE-201ENST00000377902 CLPBQ9H078 707 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 DCSTAMPQ9H295 470 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 ERVK-11Q9UQG0 969 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 OARD1Q9Y530 152 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 PGLSO95336 258 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 PRAMEF1O95521 474 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 VIPP01282 170 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 GTF2E2P29084 291 aaKnown RBP17.53■□□□□ 0.4
GNE-201ENST00000377902 EIF2DP41214 584 aaKnown RBP17.53■□□□□ 0.4
GNE-201ENST00000377902 PPP5CP53041 499 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 CACNG1Q06432 222 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 RING1Q06587 406 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 ARMC8Q8IUR7 673 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 APH1BQ8WW43 257 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 PROX1Q92786 737 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 DNASE1L2Q92874 299 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 KCNH6Q9H252 994 aa17.53■□□□□ 0.4
GNE-201ENST00000377902 IL1RAPQ9NPH3 570 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms