RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CDH3P22223 829 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 DGKEP52429 567 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 SH3BP2P78314 561 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 MANEALQ5VSG8 457 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 CBR4Q8N4T8 237 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 FAM47BQ8NA70 645 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 GPR26Q8NDV2 337 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 OR9A1PQ8NGU1 263 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 RAB11FIP5Q9BXF6 653 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 SEMA3GQ9NS98 782 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 SLC9A8Q9Y2E8 581 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 DNAJC15Q9Y5T4 150 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 PDE9AO76083 593 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 HNRNPCP07910 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 C6P13671 934 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 CCR8P51685 355 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 C21orf59P57076 290 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 SPANXN4Q5MJ08 99 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 PRR23CQ6ZRP0 262 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 TSPAN14Q8NG11 270 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 SPPL3Q8TCT6 385 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 ABHD8Q96I13 439 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 DDX18Q9NVP1 670 aaKnown RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 CXXC1Q9P0U4 656 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 LHX3Q9UBR4 397 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 CCL26Q9Y258 94 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 GMPPBQ9Y5P6 360 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 ATAD5Q96QE3 1844 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 HNRNPCL2B2RXH8 293 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 G3V2T6 193 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 PLK4O00444 970 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 GABRB3P28472 473 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 BUD31P41223 144 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 SPIBQ01892 262 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 HSPB3Q12988 150 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 ZNHIT3Q15649 155 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 SPRED3Q2MJR0 410 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 DGKKQ5KSL6 1271 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 OR4F3Q6IEY1 312 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 ABRAXAS1Q6UWZ7 409 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 CLVS1Q8IUQ0 354 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 TMEM145Q8NBT3 493 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 RERGLQ9H628 205 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 SUCOQ9UBS9 1254 aaKnown RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 LTBP1Q14766 1721 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 TNS1Q9HBL0 1735 aaKnown RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 RUNX1T1Q06455 604 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 EOGTQ5NDL2 527 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 SNAP47Q5SQN1 464 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 DCUN1D3Q8IWE4 304 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 ADGRG2Q8IZP9 1017 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 TERB1Q8NA31 727 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 BPIFB6Q8NFQ5 453 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 ZCCHC10Q8TBK6 192 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 CD200R1Q8TD46 325 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 CANT1Q8WVQ1 401 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 CENPNQ96H22 339 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 NKX1-2Q9UD57 310 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 FADS3Q9Y5Q0 445 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 HEBP2Q9Y5Z4 205 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 GREB1LQ9C091 1923 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 CXCR6O00574 342 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 KIAA0355O15063 1070 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 KLF8O95600 359 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 PGRP06401 933 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 MCCD1P59942 119 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 TMIGD1Q6UXZ0 262 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 CBARPQ8N350 705 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 ISG20Q96AZ6 181 aaKnown RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 CDH7Q9ULB5 785 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 LZTS1Q9Y250 596 aa14.14□□□□□ -0.15
TCOF1-202ENST00000377797 MRPS33Q9Y291 106 aaKnown RBP14.14□□□□□ -0.15
TCOF1-202ENST00000377797 URB1O60287 2271 aaKnown RBP14.13□□□□□ -0.15
TCOF1-202ENST00000377797 SIPA1L1O43166 1804 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 ANO7Q6IWH7 933 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 SPACA7Q96KW9 195 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 CHID1Q9BWS9 393 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 IGLON5A6NGN9 336 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 ZNF8P17098 575 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-202ENST00000377797 GSK3BP49841 420 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 EEFSECP57772 596 aaKnown RBP14.13□□□□□ -0.15
TCOF1-202ENST00000377797 RABL3Q5HYI8 236 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 GCNT6Q5T4J0 391 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 CGB2Q6NT52 195 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 RORBQ92753 470 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 NACC2Q96BF6 587 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 OR51B5Q9H339 312 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 GDE1Q9NZC3 331 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 PLAGL1Q9UM63 463 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 MYCLP1P12525 358 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-202ENST00000377797 S100A5P33763 92 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 CCR4P51679 360 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 TRAP1Q12931 704 aaKnown RBP14.13□□□□□ -0.15
TCOF1-202ENST00000377797 PTPRRQ15256 657 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 RTL10Q7L3V2 364 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 OR10H1Q9Y4A9 318 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 EME2A4GXA9 379 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-202ENST00000377797 LINC01553A4QN01 128 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 IFNGR2P38484 337 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 ACADVLP49748 655 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms