RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ZBTB11O95625 1053 aaPredicted RBP8.01□□□□□ -1.13
UBR4-202ENST00000375224 ADH5P11766 374 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 TIMP2P16035 220 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 IL10P22301 178 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 SLC6A2P23975 617 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 SEMG2Q02383 582 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 PDK3Q15120 406 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 RGS21Q2M5E4 152 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 C18orf21Q32NC0 220 aaPredicted RBP8.01□□□□□ -1.13
UBR4-202ENST00000375224 CACHD1Q5VU97 1274 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 TRIM46Q7Z4K8 759 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 ERI1Q8IV48 349 aaKnown RBP8.01□□□□□ -1.13
UBR4-202ENST00000375224 NRSN1Q8IZ57 195 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 CENPSQ8N2Z9 138 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 LSMEM1Q8N8F7 131 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 NAT16Q8N8M0 369 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 ATL1Q8WXF7 558 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 HPS1Q92902 700 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 PKP2Q99959 881 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 ASIC5Q9NY37 505 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 KLHL3Q9UH77 587 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 BPTFQ12830 3046 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 PSMD11O00231 422 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 DENRO43583 198 aaKnown RBP8.01□□□□□ -1.13
UBR4-202ENST00000375224 KCNJ13O60928 360 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 CEBPBP17676 345 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 JAK1P23458 1154 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 PTGS2P35354 604 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 GNPDA1P46926 289 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 CLK3P49761 638 aaKnown RBP8.01□□□□□ -1.13
UBR4-202ENST00000375224 ATXN3P54252 364 aaPredicted RBP8.01□□□□□ -1.13
UBR4-202ENST00000375224 NTHL1P78549 312 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 HSPA14Q0VDF9 509 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 KCNC3Q14003 757 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 ABRAXAS2Q15018 415 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 GGTA1PQ4G0N0 100 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 NADK2Q4G0N4 442 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 C6orf10Q5SRN2 563 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 EGFLAMQ63HQ2 1017 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 TMEM215Q68D42 235 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 LCN8Q6JVE9 175 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 CYP20A1Q6UW02 462 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 MMAAQ8IVH4 418 aaKnown RBP8.01□□□□□ -1.13
UBR4-202ENST00000375224 PROKR1Q8TCW9 393 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 SKA2Q8WVK7 121 aaPredicted RBP8.01□□□□□ -1.13
UBR4-202ENST00000375224 ASB11Q8WXH4 323 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 UHRF1Q96T88 793 aaPredicted RBP8.01□□□□□ -1.13
UBR4-202ENST00000375224 PCDH12Q9NPG4 1184 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 ARMC1Q9NVT9 282 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 PDE10AQ9Y233 779 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 SLC27A6Q9Y2P4 619 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 AP3M1Q9Y2T2 418 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 PCDHA9Q9Y5H5 950 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 NOTCH4Q99466 2003 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 CENPBD1B2RD01 187 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 FXYD1O00168 92 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 IDH3BO43837 385 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 PRNPP04156 253 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 SLC2A4P14672 509 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 SYN1P17600 705 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 HTR6P50406 440 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 FOLH1Q04609 750 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 TLR1Q15399 786 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 SF3B4Q15427 424 aaKnown RBP eCLIP8.01□□□□□ -1.137e-8■■■■■ 38.6
UBR4-202ENST00000375224 DCDC5Q6ZRR9 648 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 DGLUCYQ7Z3D6 616 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 TICAM1Q8IUC6 712 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 HID1Q8IV36 788 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 GALNT4Q8N4A0 578 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 DCBLD1Q8N8Z6 715 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 TMEM102Q8N9M5 508 aaPredicted RBP8.01□□□□□ -1.13
UBR4-202ENST00000375224 ZFP28Q8NHY6 868 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 CYB5D2Q8WUJ1 264 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 TMEM125Q96AQ2 219 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 DACT3Q96B18 629 aaPredicted RBP8.01□□□□□ -1.13
UBR4-202ENST00000375224 ZSWIM3Q96MP5 696 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 VPS35Q96QK1 796 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 CTRCQ99895 268 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 ACTR8Q9H981 624 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 CMTM6Q9NX76 183 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 KLQ9UEF7 1012 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 ZNF490Q9ULM2 529 aaPredicted RBP8.01□□□□□ -1.13
UBR4-202ENST00000375224 SNX6Q9UNH7 406 aa8.01□□□□□ -1.13
UBR4-202ENST00000375224 NUP210Q8TEM1 1887 aaPredicted RBP8□□□□□ -1.13
UBR4-202ENST00000375224 C16orf96A6NNT2 1141 aa8□□□□□ -1.13
UBR4-202ENST00000375224 LOC730098B7Z3J9 87 aa8□□□□□ -1.13
UBR4-202ENST00000375224 MANBAO00462 879 aa8□□□□□ -1.13
UBR4-202ENST00000375224 RNASEH2AO75792 299 aaKnown RBP8□□□□□ -1.13
UBR4-202ENST00000375224 NFATC1O95644 943 aa8□□□□□ -1.13
UBR4-202ENST00000375224 CYP17A1P05093 508 aa8□□□□□ -1.13
UBR4-202ENST00000375224 CISD3P0C7P0 127 aa8□□□□□ -1.13
UBR4-202ENST00000375224 UMPSP11172 480 aa8□□□□□ -1.13
UBR4-202ENST00000375224 GLULP15104 373 aa8□□□□□ -1.13
UBR4-202ENST00000375224 PSMA4P25789 261 aaKnown RBP8□□□□□ -1.13
UBR4-202ENST00000375224 IRS1P35568 1242 aa8□□□□□ -1.13
UBR4-202ENST00000375224 FAM219BQ5XKK7 198 aa8□□□□□ -1.13
UBR4-202ENST00000375224 HSD11B1LQ7Z5J1 315 aa8□□□□□ -1.13
UBR4-202ENST00000375224 PROSER1Q86XN7 944 aa8□□□□□ -1.13
UBR4-202ENST00000375224 PTRH1Q86Y79 214 aaKnown RBP8□□□□□ -1.13
UBR4-202ENST00000375224 SMG7Q92540 1137 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms