RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 KLHL25Q9H0H3 589 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 FANCEQ9HB96 536 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 ABCF3Q9NUQ8 709 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 ARL15Q9NXU5 204 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 SEMA5BQ9P283 1151 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 DKK4Q9UBT3 224 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 CTNNAL1Q9UBT7 734 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 PDE10AQ9Y233 779 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 CHD8Q9HCK8 2581 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 CDRT15L2A8MXV6 281 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 POLR1CO15160 346 aaPredicted RBP14.32□□□□□ -0.12
COL9A1-204ENST00000370496 KRT38O76015 456 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 PSMB5P28074 263 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 IMPA1P29218 277 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 AP1S2P56377 157 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 PCBP4P57723 403 aaKnown RBP14.32□□□□□ -0.12
COL9A1-204ENST00000370496 ERVPABLB-1P60509 514 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 MC2RQ01718 297 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 ACY1Q03154 408 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 FASTKQ14296 549 aaKnown RBP14.32□□□□□ -0.12
COL9A1-204ENST00000370496 CSHL1Q14406 222 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 SLC29A2Q14542 456 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 SF1Q15637 639 aaKnown RBP14.32□□□□□ -0.12
COL9A1-204ENST00000370496 DCAF12Q5T6F0 453 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 THEMIS2Q5TEJ8 643 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 WDR93Q6P2C0 686 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 CEACAM20Q6UY09 585 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 MBOAT1Q6ZNC8 495 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 CLEC14AQ86T13 490 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 PPFIBP2Q8ND30 876 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 ZNF480Q8WV37 535 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 ANKRD49Q8WVL7 239 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 DLG3Q92796 817 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 PMEPA1Q969W9 287 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 MED8Q96G25 268 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 CCDC138Q96M89 665 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 TRAPPC9Q96Q05 1148 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 TEFMQ96QE5 360 aaKnown RBP14.32□□□□□ -0.12
COL9A1-204ENST00000370496 TAAR9Q96RI9 348 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 CTRCQ99895 268 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 DDA1Q9BW61 102 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 ASPSCR1Q9BZE9 553 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 UNKQ9C0B0 810 aaKnown RBP14.32□□□□□ -0.12
COL9A1-204ENST00000370496 PDE7BQ9NP56 450 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 CCDC177Q9NQR7 707 aaPredicted RBP14.32□□□□□ -0.12
COL9A1-204ENST00000370496 SNX15Q9NRS6 342 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 INTS7Q9NVH2 962 aaKnown RBP14.32□□□□□ -0.12
COL9A1-204ENST00000370496 UTP6Q9NYH9 597 aaKnown RBP14.32□□□□□ -0.12
COL9A1-204ENST00000370496 BTRCQ9Y297 605 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 PCDHGA7Q9Y5G6 932 aa14.32□□□□□ -0.12
COL9A1-204ENST00000370496 FREM2Q5SZK8 3169 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 A0A087X1B8 175 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 HAX1O00165 279 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 CDC7O00311 574 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 CCNDBP1O95273 360 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 WISP3O95389 354 aaPredicted RBP14.31□□□□□ -0.12
COL9A1-204ENST00000370496 GUCA1CO95843 209 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 SLC35E2BP0CK96 405 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 MAGP20916 626 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 CNTFP26441 200 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 SLC5A2P31639 672 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 TBPL1P62380 186 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 TSNQ15631 228 aaKnown RBP14.31□□□□□ -0.12
COL9A1-204ENST00000370496 SUSD1Q6UWL2 747 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 SBSNQ6UWP8 590 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 CCDC91Q7Z6B0 441 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 FAM20CQ8IXL6 584 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 D2HGDHQ8N465 521 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 SPATA6LQ8N4H0 392 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 FLVCR1-AS1Q8TAF5 88 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 DCAKDQ8WVC6 231 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 ANKRD7Q92527 254 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 N4BP2L2Q92802 583 aaPredicted RBP14.31□□□□□ -0.12
COL9A1-204ENST00000370496 CNTNAP3BQ96NU0 1288 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 MIPEPQ99797 713 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 ACAT2Q9BWD1 397 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 CNTNAP3Q9BZ76 1288 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 APMAPQ9HDC9 416 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 FBXO8Q9NRD0 319 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 FOXJ2Q9P0K8 574 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 STOX2Q9P2F5 926 aaPredicted RBP14.31□□□□□ -0.12
COL9A1-204ENST00000370496 TAC3Q9UHF0 121 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 ZNF180Q9UJW8 692 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 TLK1Q9UKI8 766 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 IKZF3Q9UKT9 509 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 B3GALT1Q9Y5Z6 326 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 ANKRD12Q6UB98 2062 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 IGF2RP11717 2491 aa14.31□□□□□ -0.12
COL9A1-204ENST00000370496 A0A1W2PPV9 198 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 C9orf172C9J069 976 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 NVLO15381 856 aaKnown RBP14.3□□□□□ -0.12
COL9A1-204ENST00000370496 KRT37O76014 449 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 FKBP9O95302 570 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 FOLR1P15328 257 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 TYK2P29597 1187 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 CMPK1P30085 196 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 ATP6V0D1P61421 351 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 NAA25Q14CX7 972 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 GPR19Q15760 415 aa14.3□□□□□ -0.12
COL9A1-204ENST00000370496 PPP1R3AQ16821 1122 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms