RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 OTCP00480 354 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 TGFBR1P36897 503 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 MAGEA11P43364 429 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 ZNF140P52738 457 aaPredicted RBP17.01■□□□□ 0.31
CHTOP-203ENST00000368690 PTPRCAPQ14761 206 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 CARD16Q5EG05 197 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 UBQLNLQ8IYU4 475 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 FAM120BQ96EK7 910 aaKnown RBP17.01■□□□□ 0.31
CHTOP-203ENST00000368690 SERPINB11Q96P15 392 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 ACBD6Q9BR61 282 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 DPY30Q9C005 99 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 ZYG11BQ9C0D3 744 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 POLR1EQ9GZS1 481 aaKnown RBP17.01■□□□□ 0.31
CHTOP-203ENST00000368690 MAN2B2Q9Y2E5 1009 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 FRMPD3Q5JV73 1810 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 WNT9AO14904 365 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 RGS14O43566 566 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 WBP4O75554 376 aaKnown RBP17■□□□□ 0.31
CHTOP-203ENST00000368690 RPLP0P05388 317 aaKnown RBP17■□□□□ 0.31
CHTOP-203ENST00000368690 HOXA9P31269 272 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 HTR3AP46098 478 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 LIMK1P53667 647 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 PLIN5Q00G26 463 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 MGAT3Q09327 533 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 PIK3R6Q5UE93 754 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 GCNT7Q6ZNI0 430 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 SLC46A3Q7Z3Q1 461 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 SLC22A15Q8IZD6 547 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 PGBD3Q8N328 593 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 PSMG2Q969U7 264 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 CDK15Q96Q40 435 aa17■□□□□ 0.31
CHTOP-203ENST00000368690 TRMT6Q9UJA5 497 aaKnown RBP17■□□□□ 0.31
CHTOP-203ENST00000368690 TIMM13Q9Y5L4 95 aaPredicted RBP17■□□□□ 0.31
CHTOP-203ENST00000368690 PTPRDP23468 1912 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 A0A096LPI6 279 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 NOTOA8MTQ0 251 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 PDZK1P1A8MUH7 402 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 M0R082 166 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 SLC28A1O00337 649 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 OR7A17O14581 309 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 PER2O15055 1255 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 TPD52L2O43399 206 aaKnown RBP16.99■□□□□ 0.31
CHTOP-203ENST00000368690 ALX3O95076 343 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 CCNDBP1O95273 360 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 PKMP14618 531 aaKnown RBP16.99■□□□□ 0.31
CHTOP-203ENST00000368690 SLC2A4P14672 509 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 ALOX12P18054 663 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 GTF2E2P29084 291 aaKnown RBP16.99■□□□□ 0.31
CHTOP-203ENST00000368690 ABHD18Q0P651 414 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 SMN1Q16637 294 aaKnown RBP16.99■□□□□ 0.31
CHTOP-203ENST00000368690 TOR1AIP1Q5JTV8 583 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 ATAD3CQ5T2N8 411 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 RNF19BQ6ZMZ0 732 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 CEP68Q76N32 757 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 GOLGA7Q7Z5G4 137 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 OR4F6Q8NGB9 312 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 SETD6Q8TBK2 473 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 CDK5RAP1Q96SZ6 601 aaKnown RBP16.99■□□□□ 0.31
CHTOP-203ENST00000368690 SEMA3CQ99985 751 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 RTP3Q9BQQ7 232 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 RHNO1Q9BSD3 238 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 KCNH6Q9H252 994 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 FBXL12Q9NXK8 326 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 PADI3Q9ULW8 664 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 COMMD10Q9Y6G5 202 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 DPM1O60762 260 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 PGLSO95336 258 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 TRAPPC2P0DI81 140 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 TRAPPC2BP0DI82 140 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 CCL5P13501 91 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 CYP4B1P13584 511 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 GADD45AP24522 165 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 DDOSTP39656 456 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 OR2B6P58173 313 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 ABRAXAS2Q15018 415 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 CDK10Q15131 360 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 PTPRNQ16849 979 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 AAK1Q2M2I8 961 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 SPANXN4Q5MJ08 99 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 CACHD1Q5VU97 1274 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 AHSA2Q719I0 299 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 PAF1Q8N7H5 531 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 MYDGFQ969H8 173 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 PKMYT1Q99640 499 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 TBC1D14Q9P2M4 693 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 TRAPPC4Q9Y296 219 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 WBP11Q9Y2W2 641 aaKnown RBP16.99■□□□□ 0.31
CHTOP-203ENST00000368690 ANGPTL3Q9Y5C1 460 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 PCDHGA3Q9Y5H0 932 aa16.99■□□□□ 0.31
CHTOP-203ENST00000368690 IGLV3-10A0A075B6K4 115 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 MOCS2O96007 188 aaPredicted RBP16.98■□□□□ 0.31
CHTOP-203ENST00000368690 CLCN4P51793 760 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 RPL38P63173 70 aaKnown RBP16.98■□□□□ 0.31
CHTOP-203ENST00000368690 GTF2H2Q13888 395 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 E2F2Q14209 437 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 DDR2Q16832 855 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 TIGD6Q17RP2 521 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 TTLL9Q3SXZ7 439 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 GTF2H2CQ6P1K8 395 aa16.98■□□□□ 0.31
CHTOP-203ENST00000368690 FAHD1Q6P587 224 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms