RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 TEDDM1Q5T9Z0 273 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 C16orf46Q6P387 395 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 TRMT10BQ6PF06 316 aaKnown RBP23.04■■□□□ 1.28
PFDN2-201ENST00000368010 GALNT7Q86SF2 657 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 ANKMY2Q8IV38 441 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 CPNE9Q8IYJ1 553 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 SLC38A9Q8NBW4 561 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 DPH5Q9H2P9 285 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 AKIRIN1Q9H9L7 192 aaPredicted RBP23.04■■□□□ 1.28
PFDN2-201ENST00000368010 WHRNQ9P202 907 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 PCDHGA6Q9Y5G7 932 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 E7ESA3 106 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 MYO1CO00159 1063 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 MEN1O00255 615 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 EIF3FO00303 357 aaPredicted RBP23.03■■□□□ 1.28
PFDN2-201ENST00000368010 PRICKLE3O43900 615 aaPredicted RBP23.03■■□□□ 1.28
PFDN2-201ENST00000368010 PRB1P04280 392 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 HBQ1P09105 142 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 GABRB3P28472 473 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 CYP2A13Q16696 494 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 LRRC8EQ6NSJ5 796 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 FAM199XQ6PEV8 388 aaPredicted RBP23.03■■□□□ 1.28
PFDN2-201ENST00000368010 BORAQ6PGQ7 559 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 DNAJC22Q8N4W6 341 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 FBXO36Q8NEA4 188 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 C16orf45Q96MC5 204 aaPredicted RBP23.03■■□□□ 1.28
PFDN2-201ENST00000368010 PCMTD2Q9NV79 361 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 TAS2R13Q9NYV9 303 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 SLC17A6Q9P2U8 582 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 PLCL2Q9UPR0 1127 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 KLHL20Q9Y2M5 609 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 AP1M2Q9Y6Q5 423 aa23.03■■□□□ 1.28
PFDN2-201ENST00000368010 ZNF749O43361 778 aa23.02■■□□□ 1.28
PFDN2-201ENST00000368010 HCRTR1O43613 425 aa23.02■■□□□ 1.28
PFDN2-201ENST00000368010 AHSGP02765 367 aa23.02■■□□□ 1.28
PFDN2-201ENST00000368010 RORAP35398 523 aa23.02■■□□□ 1.28
PFDN2-201ENST00000368010 SKIV2L2P42285 1042 aaKnown RBP23.02■■□□□ 1.28
PFDN2-201ENST00000368010 RPS15P62841 145 aaKnown RBP23.02■■□□□ 1.28
PFDN2-201ENST00000368010 CKAP4Q07065 602 aaKnown RBP23.02■■□□□ 1.28
PFDN2-201ENST00000368010 FRG1Q14331 258 aaKnown RBP23.02■■□□□ 1.28
PFDN2-201ENST00000368010 ARHGAP19Q14CB8 494 aa23.02■■□□□ 1.28
PFDN2-201ENST00000368010 ZNF517Q6ZMY9 492 aaPredicted RBP23.02■■□□□ 1.28
PFDN2-201ENST00000368010 DSELQ8IZU8 1212 aa23.02■■□□□ 1.28
PFDN2-201ENST00000368010 FBXO15Q8NCQ5 510 aaPredicted RBP23.02■■□□□ 1.28
PFDN2-201ENST00000368010 MED8Q96G25 268 aa23.02■■□□□ 1.28
PFDN2-201ENST00000368010 GPR87Q9BY21 358 aa23.02■■□□□ 1.28
PFDN2-201ENST00000368010 CHST8Q9H2A9 424 aa23.02■■□□□ 1.28
PFDN2-201ENST00000368010 IRAK4Q9NWZ3 460 aa23.02■■□□□ 1.28
PFDN2-201ENST00000368010 ZNF839A8K0R7 811 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 ZBTB14O43829 449 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 ERGP11308 486 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 MCM3P25205 808 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 HSD17B2P37059 387 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 RGS4P49798 205 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 CBLBQ13191 982 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 FASTKQ14296 549 aaKnown RBP23.01■■□□□ 1.27
PFDN2-201ENST00000368010 FASTKD3Q14CZ7 662 aaKnown RBP23.01■■□□□ 1.27
PFDN2-201ENST00000368010 RBM20Q5T481 1227 aaKnown RBP23.01■■□□□ 1.27
PFDN2-201ENST00000368010 CYHR1Q6ZMK1 362 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 ZNF572Q7Z3I7 529 aaPredicted RBP23.01■■□□□ 1.27
PFDN2-201ENST00000368010 PIWIL4Q7Z3Z4 852 aaKnown RBP23.01■■□□□ 1.27
PFDN2-201ENST00000368010 SPNS2Q8IVW8 549 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 SYTL1Q8IYJ3 562 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 ZBED8Q8IZ13 594 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 ASB11Q8WXH4 323 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 SMPDL3AQ92484 453 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 PKP4Q99569 1192 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 SPRTNQ9H040 489 aaPredicted RBP23.01■■□□□ 1.27
PFDN2-201ENST00000368010 RAB17Q9H0T7 212 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 EURLQ9NYK6 297 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 ZFATQ9P243 1243 aa23.01■■□□□ 1.27
PFDN2-201ENST00000368010 CORO1CQ9ULV4 474 aaPredicted RBP23.01■■□□□ 1.27
PFDN2-201ENST00000368010 UTP11Q9Y3A2 253 aaKnown RBP23.01■■□□□ 1.27
PFDN2-201ENST00000368010 A0A1W2PPV9 198 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 H3BMH7 237 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 ZSCAN9O15535 394 aaPredicted RBP23■■□□□ 1.27
PFDN2-201ENST00000368010 CREG1O75629 220 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 SYF2O95926 243 aaKnown RBP23■■□□□ 1.27
PFDN2-201ENST00000368010 PSMB5P28074 263 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 MGAT5Q09328 741 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 ZC3H12BQ5HYM0 836 aaKnown RBP23■■□□□ 1.27
PFDN2-201ENST00000368010 ATP1A1-AS1Q5TC04 95 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 DUPD1Q68J44 220 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 TLDC1Q6P9B6 456 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 FIGLAQ6QHK4 219 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 OR2L3Q8NG85 312 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 OR2A1Q8NGT9 310 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 SEC14L1Q92503 715 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 ZUFSPQ96AP4 578 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 RUFY1Q96T51 708 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 MIPEPQ99797 713 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 FAM117AQ9C073 453 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 ACTL8Q9H568 366 aa23■■□□□ 1.27
PFDN2-201ENST00000368010 TARM1B6A8C7 271 aa22.99■■□□□ 1.27
PFDN2-201ENST00000368010 GFYI3L273 518 aa22.99■■□□□ 1.27
PFDN2-201ENST00000368010 RECKO95980 971 aa22.99■■□□□ 1.27
PFDN2-201ENST00000368010 FAM87AP0C7U9 286 aa22.99■■□□□ 1.27
PFDN2-201ENST00000368010 PTPN4P29074 926 aa22.99■■□□□ 1.27
PFDN2-201ENST00000368010 GRIA3P42263 894 aa22.99■■□□□ 1.27
PFDN2-201ENST00000368010 CCR10P46092 362 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms