RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 IQCF5A8MTL0 148 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 CKMP06732 381 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 SERPINA4P29622 427 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 CACNG1Q06432 222 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 DPY19L1Q2PZI1 675 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 PAGE3Q5JUK9 113 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 LYPLAL1Q5VWZ2 237 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 TRMT11Q7Z4G4 463 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 CTU1Q7Z7A3 348 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 CIR1Q86X95 450 aaPredicted RBP15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 KCTD7Q96MP8 289 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 BBS4Q96RK4 519 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 BARD1Q99728 777 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 TBC1D17Q9HA65 648 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 MAN2B2Q9Y2E5 1009 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 RPL36Q9Y3U8 105 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 PCDHGB6Q9Y5F9 930 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 KCNE2Q9Y6J6 123 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 STX16O14662 325 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 UGT2B17O75795 530 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 SLC9A3P48764 834 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 CDK5R2Q13319 367 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 DTWD1Q8N5C7 304 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 SLC37A3Q8NCC5 494 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 OR6Q1Q8NGQ2 317 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 GPR152Q8TDT2 470 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 MRPL48Q96GC5 212 aaKnown RBP15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 TMEM138Q9NPI0 162 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 MCUBQ9NWR8 336 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 TAS2R7Q9NYW3 318 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 PCDHGB5Q9Y5G0 923 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 PDE4DIPQ5VU43 2346 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 OR2B3O76000 313 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 OPN1SWP03999 348 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 LCKP06239 509 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 TARBP2Q15633 366 aaKnown RBP15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 CYBRD1Q53TN4 286 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 PHC2Q8IXK0 858 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 HS3ST5Q8IZT8 346 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 CLP1Q92989 425 aaKnown RBP15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 ZNF607Q96SK3 696 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 KCTD5Q9NXV2 234 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 TVP23BQ9NYZ1 205 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 MITFO75030 526 aaPredicted RBP15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 PAPSS2O95340 614 aaPredicted RBP15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 IFNA7P01567 189 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 ATF6P18850 670 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 RPS3P23396 243 aaKnown RBP eCLIP15.62■□□□□ 0.091e-7■■■□□ 17.2
CLSTN1-201ENST00000361311 CLK3P49761 638 aaKnown RBP15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 STC1P52823 247 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 ST8SIA6P61647 398 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 PTPRCAPQ14761 206 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 TREML2Q5T2D2 321 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 MSANTD2Q6P1R3 559 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 VN1R5Q7Z5H4 357 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 DENND1CQ8IV53 801 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 GPC2Q8N158 579 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 OR7D4Q8NG98 312 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 SCAMP5Q8TAC9 235 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 EEF1AKMT1Q8WVE0 214 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 ZNF599Q96NL3 588 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 PDGFDQ9GZP0 370 aaPredicted RBP15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 EIF3KQ9UBQ5 218 aaKnown RBP15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 INTS6Q9UL03 887 aaKnown RBP15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 PPP2R3BQ9Y5P8 575 aa15.62■□□□□ 0.09
CLSTN1-201ENST00000361311 H7C4K7 107 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 DLGAP1O14490 977 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 KPNA6O60684 536 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 PRG2P13727 222 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 PCSK2P16519 638 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 CHIT1Q13231 466 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 ZNF267Q14586 743 aaPredicted RBP15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 PPTC7Q8NI37 304 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 GSTO2Q9H4Y5 243 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 J3KR12 359 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 ATN1P54259 1190 aaPredicted RBP15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 HSF2Q03933 536 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 ABRQ12979 859 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 PIK3R6Q5UE93 754 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 SMYD5Q6GMV2 418 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 LARP4Q71RC2 724 aaKnown RBP eCLIP15.61■□□□□ 0.092e-9■□□□□ 10
CLSTN1-201ENST00000361311 ARRDC4Q8NCT1 418 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 ART5Q96L15 291 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 GULP1Q9UBP9 304 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 NUP98P52948 1817 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 GGT1P19440 569 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 CSTF2P33240 577 aaKnown RBP eCLIP15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 SREBF2Q12772 1141 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 FAM117BQ6P1L5 589 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 DSG4Q86SJ6 1040 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 ISCA2Q86U28 154 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 CHDHQ8NE62 594 aaPredicted RBP15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 RHEBL1Q8TAI7 183 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 KLHL6Q8WZ60 621 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 SGK2Q9HBY8 427 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 SEMA3GQ9NS98 782 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 FAM105AQ9NUU6 356 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 TRPV2Q9Y5S1 764 aa15.61■□□□□ 0.09
CLSTN1-201ENST00000361311 KIAA0513O60268 411 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms