RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 EXT2Q93063 718 aa12.01□□□□□ -0.49
NIF3L1-201ENST00000359683 CCDC74AQ96AQ1 378 aa12.01□□□□□ -0.49
NIF3L1-201ENST00000359683 CDC6Q99741 560 aa12.01□□□□□ -0.49
NIF3L1-201ENST00000359683 EGFL8Q99944 293 aa12.01□□□□□ -0.49
NIF3L1-201ENST00000359683 COPG2Q9UBF2 871 aa12.01□□□□□ -0.49
NIF3L1-201ENST00000359683 FTSJ1Q9UET6 329 aa12.01□□□□□ -0.49
NIF3L1-201ENST00000359683 RP1P56715 2156 aa12.01□□□□□ -0.49
NIF3L1-201ENST00000359683 PCNX2A6NKB5 2137 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 A8MT66 165 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 STX16-NPEPL1H3BU86 382 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 BTN3A3O00478 584 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 STX16O14662 325 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 PRICKLE3O43900 615 aaPredicted RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 UBXN7O94888 489 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 S100BP04271 92 aaPredicted RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 MYL2P10916 166 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 GFAPP14136 432 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 PRKAA2P54646 552 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 WDR4P57081 412 aaKnown RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 OR1D5P58170 312 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 PPP2R2AP63151 447 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 SQSTM1Q13501 440 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 NAE1Q13564 534 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 SETDB1Q15047 1291 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 C18orf21Q32NC0 220 aaPredicted RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 PERM1Q5SV97 790 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 EFL1Q7Z2Z2 1120 aaKnown RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 PTGR2Q8N8N7 351 aaPredicted RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 LMNTD1Q8N9Z9 388 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 CCDC63Q8NA47 563 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 UBTD2Q8WUN7 234 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 SMPDL3AQ92484 453 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 CCDC126Q96EE4 140 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 TMEM79Q9BSE2 394 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 SGPP1Q9BX95 441 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 ATG10Q9H0Y0 220 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 EPB41L1Q9H4G0 881 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 OXSMQ9NWU1 459 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 KCNK4Q9NYG8 393 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 OGFRQ9NZT2 677 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 EPG5Q9HCE0 2579 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 IGHV1OR21-1A0A087WYE8 117 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 A0A1W2PPV9 198 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 OR6C74A6NCV1 312 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 TM4SF5O14894 197 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 ZW10O43264 779 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 TNFSF14O43557 240 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 IPO13O94829 963 aaKnown RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 PROS1P07225 676 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 CHRM5P08912 532 aaPredicted RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 ALDH4A1P30038 563 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 HPDP32754 393 aaPredicted RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 SLC6A12P48065 614 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 AGTR2P50052 363 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 DNAJB13P59910 316 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 PCLAFQ15004 111 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 PCBP2Q15366 365 aaKnown RBP eCLIP12□□□□□ -0.49
NIF3L1-201ENST00000359683 PTCHD3Q3KNS1 767 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 METTL2BQ6P1Q9 378 aaKnown RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 KLHL35Q6PF15 583 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 SPRED1Q7Z699 444 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 SLC22A9Q8IVM8 553 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 SYTL1Q8IYJ3 562 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 C2orf73Q8N5S3 287 aaPredicted RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 ANKRD42Q8N9B4 389 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 PPFIBP2Q8ND30 876 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 IFI44Q8TCB0 444 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 ESAMQ96AP7 390 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 PHF21BQ96EK2 531 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 SELENOSQ9BQE4 189 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 CD244Q9BZW8 370 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 RAB33BQ9H082 229 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 CNOT10Q9H9A5 744 aaKnown RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 INTS7Q9NVH2 962 aaKnown RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 HRASLS2Q9NWW9 162 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 NKIRAS1Q9NYS0 192 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 WWOXQ9NZC7 414 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 TNPO3Q9Y5L0 923 aaKnown RBP12□□□□□ -0.49
NIF3L1-201ENST00000359683 ENTPD2Q9Y5L3 495 aa12□□□□□ -0.49
NIF3L1-201ENST00000359683 PCM1Q15154 2024 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 OR5K3A6NET4 321 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 BIRC5O15392 142 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 STK16O75716 305 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 GP1BAP07359 652 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 BPGMP07738 259 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 TYRP1P17643 537 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 AMD1P17707 334 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 NR1D1P20393 614 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 IMPDH1P20839 514 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 CCND1P24385 295 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 CD1CP29017 333 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 PEBP1P30086 187 aaKnown RBP11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 ALDH3A1P30838 453 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 SERPINB4P48594 390 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 HSPA7P48741 367 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 GPLD1P80108 840 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 SUSD1Q6UWL2 747 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 GLRX5Q86SX6 157 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 OOSP2Q86WS3 158 aa11.99□□□□□ -0.49
NIF3L1-201ENST00000359683 C10orf107Q8IVU9 208 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms