RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CDC20Q12834 499 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 GTDC1Q4AE62 458 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 GPRC6AQ5T6X5 926 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 MFSD14CQ5VZR4 134 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 ANKRD34AQ69YU3 496 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 IFNL1Q8IU54 200 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 BEND7Q8N7W2 519 aaPredicted RBP17.26■□□□□ 0.35
RTN4-204ENST00000357732 NDNFQ8TB73 568 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 LINC01599Q8WXQ3 324 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 MAGEB10Q96LZ2 347 aaPredicted RBP17.26■□□□□ 0.35
RTN4-204ENST00000357732 PITX2Q99697 317 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 HTATIP2Q9BUP3 242 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 SP140LQ9H930 580 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 CPNE5Q9HCH3 593 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 ACOT13Q9NPJ3 140 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 FARSBQ9NSD9 589 aaKnown RBP17.26■□□□□ 0.35
RTN4-204ENST00000357732 EVLQ9UI08 416 aaPredicted RBP17.26■□□□□ 0.35
RTN4-204ENST00000357732 FNDC3AQ9Y2H6 1198 aaKnown RBP17.26■□□□□ 0.35
RTN4-204ENST00000357732 GPC6Q9Y625 555 aaPredicted RBP17.26■□□□□ 0.35
RTN4-204ENST00000357732 ZNF106Q9H2Y7 1883 aaKnown RBP17.26■□□□□ 0.35
RTN4-204ENST00000357732 LOC730098B7Z3J9 87 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 SEPT4O43236 478 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 CA12O43570 354 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 PRAMEF1O95521 474 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 SEMG1P04279 462 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 NR4A1P22736 598 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 MAGEA10P43363 369 aaPredicted RBP17.26■□□□□ 0.35
RTN4-204ENST00000357732 CLK3P49761 638 aaKnown RBP17.26■□□□□ 0.35
RTN4-204ENST00000357732 PPP5CP53041 499 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 AP1S1P61966 158 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 TWF1Q12792 350 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 BOP1Q14137 746 aaKnown RBP17.26■□□□□ 0.35
RTN4-204ENST00000357732 ABI1Q8IZP0 508 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 TCAIMQ8N3R3 496 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 KIAA1958Q8N8K9 716 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 SCAIQ8N9R8 606 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 LHX3Q9UBR4 397 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 SNX6Q9UNH7 406 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 U3KQV3 271 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 SAGE2PA6NJ88 616 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 H0Y626 953 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 H7C4K7 107 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 SLC25A14O95258 325 aaPredicted RBP17.25■□□□□ 0.35
RTN4-204ENST00000357732 TRIM16O95361 564 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 ANXA5P08758 320 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 BMP4P12644 408 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 GGT5P36269 586 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 DAPP51397 102 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 FCGRTP55899 365 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 NFATC2Q13469 925 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 MAD2L1BPQ15013 274 aaPredicted RBP17.25■□□□□ 0.35
RTN4-204ENST00000357732 PHKG1Q16816 387 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 GPR33Q49SQ1 333 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 ARMC12Q5T9G4 340 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 KIAA1614Q5VZ46 1190 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 RNF219Q5W0B1 726 aaPredicted RBP17.25■□□□□ 0.35
RTN4-204ENST00000357732 CADM3Q8N126 398 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 SLC35B4Q969S0 331 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 CMTM7Q96FZ5 175 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 APOL5Q9BWW9 433 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 ACPTQ9BZG2 426 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 RIBC2Q9H4K1 309 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 KDM1AO60341 852 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 PRMT3O60678 531 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 CD160O95971 181 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 FABP3P05413 133 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 ACRV1P26436 265 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 UGT2B10P36537 528 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 RXRGP48443 463 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 PHC1P78364 1004 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 CRHR2Q13324 411 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 PAGE2BQ5JRK9 111 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 PERM1Q5SV97 790 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 ADGRF1Q5T601 910 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 UBE2UQ5VVX9 321 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 CXorf57Q6NSI4 855 aaKnown RBP17.25■□□□□ 0.35
RTN4-204ENST00000357732 LRRC70Q7Z2Q7 622 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 DENND1CQ8IV53 801 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 CPA6Q8N4T0 437 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 TTC29Q8NA56 475 aaPredicted RBP17.25■□□□□ 0.35
RTN4-204ENST00000357732 ZNF540Q8NDQ6 660 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 RHOXF1Q8NHV9 184 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 SIGLEC11Q96RL6 698 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 SPATA9Q9BWV2 254 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 SLIRPQ9GZT3 109 aaKnown RBP17.25■□□□□ 0.35
RTN4-204ENST00000357732 SLC32A1Q9H598 525 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 SLC6A13Q9NSD5 602 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 VNN3Q9NY84 501 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 SCHIP1Q9P0W5 487 aaPredicted RBP17.25■□□□□ 0.35
RTN4-204ENST00000357732 OSGIN1Q9UJX0 560 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 UGT2A1Q9Y4X1 527 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 PCDHB9Q9Y5E1 797 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 MICAL3Q7RTP6 2002 aa17.25■□□□□ 0.35
RTN4-204ENST00000357732 HTR3EA5X5Y0 456 aa17.24■□□□□ 0.35
RTN4-204ENST00000357732 E9PQ18 207 aa17.24■□□□□ 0.35
RTN4-204ENST00000357732 VNN2O95498 520 aa17.24■□□□□ 0.35
RTN4-204ENST00000357732 PSMB9P28065 219 aa17.24■□□□□ 0.35
RTN4-204ENST00000357732 ZNF33BQ06732 778 aa17.24■□□□□ 0.35
RTN4-204ENST00000357732 ELAVL2Q12926 359 aaKnown RBP17.24■□□□□ 0.35
RTN4-204ENST00000357732 MTAPQ13126 283 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms