RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 TYW3Q6IPR3 259 aaKnown RBP6.67□□□□□ -1.34
RTN4-203ENST00000357376 TRAF7Q6Q0C0 670 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 DCDC5Q6ZRR9 648 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 PRR23BQ6ZRT6 265 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 BEND5Q7L4P6 421 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 BHLHA9Q7RTU4 235 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 GPR150Q8NGU9 434 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 TBC1D15Q8TC07 691 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 SLC39A13Q96H72 371 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 HSH2DQ96JZ2 352 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 TUBA1CQ9BQE3 449 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 INPP5KQ9BT40 448 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 ZBED2Q9BTP6 218 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 CFAP97Q9P2B7 532 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 SARDHQ9UL12 918 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 PCDHB14Q9Y5E9 798 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 DOCK1Q14185 1865 aa6.67□□□□□ -1.34
RTN4-203ENST00000357376 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.66□□□□□ -1.34
RTN4-203ENST00000357376 KPNA3O00505 521 aaPredicted RBP6.66□□□□□ -1.34
RTN4-203ENST00000357376 E2F3O00716 465 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 TNFRSF10BO14763 440 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 PDYNP01213 254 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 ALOX5P09917 674 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 CRHBPP24387 322 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 CCND3P30281 292 aaPredicted RBP6.66□□□□□ -1.34
RTN4-203ENST00000357376 HOXC13P31276 330 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 NSG1P42857 185 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 CDC42P60953 191 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 AP1S1P61966 158 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 ALDH6A1Q02252 535 aaKnown RBP6.66□□□□□ -1.34
RTN4-203ENST00000357376 FPGSQ05932 587 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 GPR17Q13304 367 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 NFATC2Q13469 925 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 GANABQ14697 944 aaKnown RBP6.66□□□□□ -1.34
RTN4-203ENST00000357376 RTP2Q5QGT7 225 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 TXNDC8Q6A555 127 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 NIPAL1Q6NVV3 410 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 SPRED1Q7Z699 444 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 AKAP14Q86UN6 197 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 COLGALT2Q8IYK4 626 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 KBTBD8Q8NFY9 601 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 MGME1Q9BQP7 344 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 MRPL9Q9BYD2 267 aaKnown RBP6.66□□□□□ -1.34
RTN4-203ENST00000357376 ARHGAP39Q9C0H5 1083 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 SLC32A1Q9H598 525 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 THUMPD1Q9NXG2 353 aaKnown RBP6.66□□□□□ -1.34
RTN4-203ENST00000357376 VPS51Q9UID3 782 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 BTBD3Q9Y2F9 522 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 WASH4PA8MWX3 477 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 CACNG3O60359 315 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 IFNA14P01570 189 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 ALPLP05186 524 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 TCF3P15923 654 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 PORP16435 677 aaPredicted RBP6.66□□□□□ -1.34
RTN4-203ENST00000357376 GSTM2P28161 218 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 PIGAP37287 484 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 ST8SIA6P61647 398 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 SLC13A2Q13183 592 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 TIGD6Q17RP2 521 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 SPATS1Q496A3 300 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 ARMCX4Q5H9R4 360 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 CTSL3PQ5NE16 218 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 NADSYN1Q6IA69 706 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 TRIM69Q86WT6 500 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 OR5AK3PQ8NH89 298 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 NDNFQ8TB73 568 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 CSGALNACT1Q8TDX6 532 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 UBASH3BQ8TF42 649 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 TRUB1Q8WWH5 349 aaKnown RBP6.66□□□□□ -1.34
RTN4-203ENST00000357376 AUTS2Q8WXX7 1259 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 ZNF347Q96SE7 839 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 KCNS3Q9BQ31 491 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 MARCH7Q9H992 704 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 GABRQQ9UN88 632 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 Q9Y3F1 56 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 C2orf78A6NCI8 922 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 ANKDD1BA6NHY2 528 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 LOC110117498-PIK3R3F6TDL0 507 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 PSMD11O00231 422 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 CCNDBP1O95273 360 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 EBLN1P0CF75 366 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 CKBP12277 381 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 GJA1P17302 382 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 DCKP27707 260 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 HOXD10P28358 340 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 DNAJA1P31689 397 aaKnown RBP6.66□□□□□ -1.34
RTN4-203ENST00000357376 KRT20P35900 424 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 OR1E2P47887 323 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 HK3P52790 923 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 YBX1P67809 324 aaKnown RBP6.66□□□□□ -1.34
RTN4-203ENST00000357376 FKBP1BP68106 108 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 ABHD18Q0P651 414 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 ELP6Q0PNE2 266 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 CAMK2GQ13555 558 aaPredicted RBP6.66□□□□□ -1.34
RTN4-203ENST00000357376 TYSND1Q2T9J0 566 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 LYPLAL1Q5VWZ2 237 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 FRG2Q64ET8 278 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 CASP12Q6UXS9 341 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 PTCHD4Q6ZW05 846 aa6.66□□□□□ -1.34
RTN4-203ENST00000357376 EIF3MQ7L2H7 374 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms