RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 TUFMP49411 452 aaKnown RBP13.28□□□□□ -0.28
TRIM4-203ENST00000355947 VLDLRP98155 873 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 NFKB2Q00653 900 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 SLC14A1Q13336 389 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 RAB41Q5JT25 222 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 PAPD5Q8NDF8 572 aaKnown RBP13.28□□□□□ -0.28
TRIM4-203ENST00000355947 PGAP3Q96FM1 320 aaPredicted RBP13.28□□□□□ -0.28
TRIM4-203ENST00000355947 CTRCQ99895 268 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 RTP3Q9BQQ7 232 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 ATG10Q9H0Y0 220 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 MMP28Q9H239 520 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 FAM124BQ9H5Z6 455 aaPredicted RBP13.28□□□□□ -0.28
TRIM4-203ENST00000355947 NMRK2Q9NPI5 230 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 KLHL3Q9UH77 587 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 TMEM98Q9Y2Y6 226 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 TRIM64A6NGJ6 449 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 H3BM21 787 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 ZW10O43264 779 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 NUAK1O60285 661 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 OTCP00480 354 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 RAB25P57735 213 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 HSPA14Q0VDF9 509 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 BCL7AQ4VC05 210 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 ARMCX4Q5H9R4 360 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 LRRC73Q5JTD7 316 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 ATXN7L2Q5T6C5 722 aaPredicted RBP13.28□□□□□ -0.28
TRIM4-203ENST00000355947 NXNL2Q5VZ03 156 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 AFTPHQ6ULP2 937 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 ATP6V0D2Q8N8Y2 350 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 TMEM203Q969S6 136 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 PPP3R2Q96LZ3 170 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 PPP1R2P1Q96PQ5 205 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 NUSAP1Q9BXS6 441 aaKnown RBP13.28□□□□□ -0.28
TRIM4-203ENST00000355947 CCSER2Q9H7U1 834 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 RHCGQ9UBD6 479 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 DYRK3O43781 588 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 CACNG3O60359 315 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 SCELO95171 688 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 SLC25A14O95258 325 aaPredicted RBP13.28□□□□□ -0.28
TRIM4-203ENST00000355947 CCDC159P0C7I6 412 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 RHOQP17081 205 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 HOXD11P31277 338 aaPredicted RBP13.28□□□□□ -0.28
TRIM4-203ENST00000355947 THPOP40225 353 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 TAF10Q12962 218 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 COL9A2Q14055 689 aaPredicted RBP13.28□□□□□ -0.28
TRIM4-203ENST00000355947 PPP2R2DQ66LE6 453 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 GALNT12Q8IXK2 581 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 CAMKK1Q8N5S9 505 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 GPR156Q8NFN8 814 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 TRNT1Q96Q11 434 aaKnown RBP13.28□□□□□ -0.28
TRIM4-203ENST00000355947 IL4I1Q96RQ9 567 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 SH3GL1Q99961 368 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 SLIRPQ9GZT3 109 aaKnown RBP13.28□□□□□ -0.28
TRIM4-203ENST00000355947 AASDHPPTQ9NRN7 309 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 THUMPD1Q9NXG2 353 aaKnown RBP13.28□□□□□ -0.28
TRIM4-203ENST00000355947 PCDHGA12O60330 932 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 LPOP22079 712 aaPredicted RBP13.27□□□□□ -0.28
TRIM4-203ENST00000355947 SLC26A3P40879 764 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 SNRPD2P62316 118 aaKnown RBP13.27□□□□□ -0.28
TRIM4-203ENST00000355947 IFITM2Q01629 132 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 USP39Q53GS9 565 aaKnown RBP13.27□□□□□ -0.28
TRIM4-203ENST00000355947 FAM180BQ6P0A1 224 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 MMAAQ8IVH4 418 aaKnown RBP13.27□□□□□ -0.28
TRIM4-203ENST00000355947 GOLM1Q8NBJ4 401 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 CD200R1Q8TD46 325 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 DPF3Q92784 378 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 RHBDF1Q96CC6 855 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 HSH2DQ96JZ2 352 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 ITPAQ9BY32 194 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 BRINP2Q9C0B6 783 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 SNTG1Q9NSN8 517 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 ARL15Q9NXU5 204 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 SH3BP4Q9P0V3 963 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 MED16Q9Y2X0 877 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 RAI2Q9Y5P3 530 aa13.27□□□□□ -0.28
TRIM4-203ENST00000355947 CPNE3O75131 537 aaKnown RBP13.27□□□□□ -0.29
TRIM4-203ENST00000355947 FABP3P05413 133 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 NUDT7P0C024 238 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 CKMT1AP12532 417 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 BCKDHAP12694 445 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 SSTR4P31391 388 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 BMPR1AP36894 532 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 PBX3P40426 434 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 HUNKP57058 714 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 GANABQ14697 944 aaKnown RBP13.27□□□□□ -0.29
TRIM4-203ENST00000355947 XKR7Q5GH72 579 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 CPZQ66K79 652 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 AGMOQ6ZNB7 445 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 GDPD3Q7L5L3 318 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 NRARPQ7Z6K4 114 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 CLECL1Q8IZS7 167 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 NECTIN3Q9NQS3 549 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 UBA2Q9UBT2 640 aaPredicted RBP13.27□□□□□ -0.29
TRIM4-203ENST00000355947 NEU3Q9UQ49 428 aa13.27□□□□□ -0.29
TRIM4-203ENST00000355947 SMIM35A0A1B0GVV1 85 aa13.26□□□□□ -0.29
TRIM4-203ENST00000355947 F5H5T6 163 aa13.26□□□□□ -0.29
TRIM4-203ENST00000355947 PEX11BO96011 259 aa13.26□□□□□ -0.29
TRIM4-203ENST00000355947 SLC35A2P78381 396 aa13.26□□□□□ -0.29
TRIM4-203ENST00000355947 TSTQ16762 297 aaKnown RBP13.26□□□□□ -0.29
TRIM4-203ENST00000355947 TBRG1Q3YBR2 411 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms