RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 SVOPLQ8N434 492 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 KCT2Q8NC54 265 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PSD4Q8NDX1 1056 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 OR2AP1Q8NGE2 309 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 OR51D1Q8NGF3 324 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 COPS5Q92905 334 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ARL6Q9H0F7 186 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 IMP3Q9NV31 184 aaKnown RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 SLC9A3R1O14745 358 aaPredicted RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ATG13O75143 517 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 B3GALNT1O75752 331 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PIAS1O75925 651 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 GNRH1P01148 92 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PTPN11Q06124 597 aaPredicted RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 GTF2H2Q13888 395 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 GTF2H2CQ6P1K8 395 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 FAM124AQ86V42 546 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 OR6Q1Q8NGQ2 317 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 VRK1Q99986 396 aaPredicted RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 TCEAL7Q9BRU2 100 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ATP13A3Q9H7F0 1226 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 DNAJC28Q9NX36 388 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PCDHB5Q9Y5E4 795 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 USP42Q9H9J4 1324 aaKnown RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 H6PDO95479 791 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 OR8U9P0C7N5 309 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 IL23RQ5VWK5 629 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 GPR153Q6NV75 609 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ZC3H14Q6PJT7 736 aaKnown RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PDZD9Q8IXQ8 264 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 RNF19AQ9NV58 838 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PCDHGB6Q9Y5F9 930 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 FAM205CA6NFA0 338 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 CHEK1O14757 476 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ZNF286BP0CG31 522 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PPP2CAP67775 309 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 HTRA4P83105 476 aaPredicted RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 NFE2Q16621 373 aaPredicted RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 NPNTQ6UXI9 565 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 CFAP77Q6ZQR2 320 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ZNF767PQ75MW2 155 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ANKRD46Q86W74 232 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 GPR135Q8IZ08 494 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 LZTR1Q8N653 840 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 MXRA8Q9BRK3 442 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 COQ10BQ9H8M1 238 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PCYOX1Q9UHG3 505 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 DPP7Q9UHL4 492 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 FRMPD4Q14CM0 1322 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 HTR1BP28222 390 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 RBMXP38159 391 aaKnown RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 CXCR3P49682 368 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 AQP4P55087 323 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 DDR1Q08345 913 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 CHRFAM7AQ494W8 412 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 C16orf86Q6ZW13 317 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 FAM35AQ86V20 835 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 KCTD15Q96SI1 283 aaPredicted RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 UXTQ9UBK9 157 aaPredicted RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 GLI2P10070 1586 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 LCMT2O60294 686 aaKnown RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 SLC25A27O95847 323 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 RARAP10276 462 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 BST1Q10588 318 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 DCDC5Q6ZRR9 648 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 GPRC5CQ9NQ84 441 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 RNF17Q9BXT8 1623 aaKnown RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 FAM230AA0A1W2PPH8 454 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 RFPL1O75677 317 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ENDOUP21128 410 aaKnown RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 MOXD1Q6UVY6 613 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 MPZL3Q6UWV2 235 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 SMIM15Q7Z3B0 74 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ZER1Q7Z7L7 766 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 BEST3Q8N1M1 668 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 LPGAT1Q92604 370 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 C2orf49Q9BVC5 232 aaPredicted RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 IMPA2O14732 288 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 MYCLP1P12525 358 aaPredicted RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 CYP2C18P33260 490 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 CD97P48960 835 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PSEN2P49810 448 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 TSTQ16762 297 aaKnown RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PCDHB16Q9NRJ7 776 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 DNAJC5BQ9UF47 199 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 TLR6Q9Y2C9 796 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 SEC14L6B5MCN3 397 aa7.87□□□□□ -1.15
SCN8A-201ENST00000354534 SLC25A14O95258 325 aaPredicted RBP7.87□□□□□ -1.15
SCN8A-201ENST00000354534 MT-CO2P00403 227 aa7.87□□□□□ -1.15
SCN8A-201ENST00000354534 ERVK-9P63128 1117 aa7.87□□□□□ -1.15
SCN8A-201ENST00000354534 ELAVL2Q12926 359 aaKnown RBP7.87□□□□□ -1.15
SCN8A-201ENST00000354534 ZNF571Q7Z3V5 609 aaPredicted RBP7.87□□□□□ -1.15
SCN8A-201ENST00000354534 NXPE1Q8N323 547 aa7.87□□□□□ -1.15
SCN8A-201ENST00000354534 TGIF2Q9GZN2 237 aa7.87□□□□□ -1.15
SCN8A-201ENST00000354534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.87□□□□□ -1.15
SCN8A-201ENST00000354534 MAGEB4O15481 346 aaPredicted RBP7.87□□□□□ -1.15
SCN8A-201ENST00000354534 NDST1P52848 882 aa7.87□□□□□ -1.15
SCN8A-201ENST00000354534 CSNK2A1P68400 391 aaPredicted RBP7.87□□□□□ -1.15
SCN8A-201ENST00000354534 ABRAXAS2Q15018 415 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms