RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ZNF140P52738 457 aaPredicted RBP11.88□□□□□ -0.51
SMAD9-201ENST00000350148 ARMCX4Q5H9R4 360 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 THOC6Q86W42 341 aaKnown RBP11.88□□□□□ -0.51
SMAD9-201ENST00000350148 TXNDC5Q8NBS9 432 aaKnown RBP11.88□□□□□ -0.51
SMAD9-201ENST00000350148 CALML5Q9NZT1 146 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 EVPLQ92817 2033 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 A0A087WXM4 84 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 SUV39H1O43463 412 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 MANFP55145 182 aaKnown RBP11.88□□□□□ -0.51
SMAD9-201ENST00000350148 FBXW4P57775 412 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 PWP1Q13610 501 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 VPS26BQ4G0F5 336 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 PLEKHM3Q6ZWE6 761 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 CHST15Q7LFX5 561 aaPredicted RBP11.88□□□□□ -0.51
SMAD9-201ENST00000350148 OLFM1Q99784 485 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 STMND1H3BQB6 276 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 IGLV3-27P01718 113 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 EPORP19235 508 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 LIPEQ05469 1076 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 RUNDC3AQ59EK9 446 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 DPPA4Q7L190 304 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 PLPP6Q8IY26 295 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 KIAA1958Q8N8K9 716 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 VN1R2Q8NFZ6 395 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 FBXO30Q8TB52 745 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 ZBTB26Q9HCK0 441 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 SLC2A4RGQ9NR83 387 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 PACSIN3Q9UKS6 424 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 FESP07332 822 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 MAPK12P53778 367 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 GLYATQ6IB77 296 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 PAOXQ6QHF9 649 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 Q6ZVL8 140 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 TAF8Q7Z7C8 310 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 SETD7Q8WTS6 366 aaKnown RBP11.87□□□□□ -0.51
SMAD9-201ENST00000350148 MIR1-1HGQ9H1L0 117 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 C12orf4Q9NQ89 552 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 SUCOQ9UBS9 1254 aaKnown RBP11.87□□□□□ -0.51
SMAD9-201ENST00000350148 WBP11Q9Y2W2 641 aaKnown RBP11.87□□□□□ -0.51
SMAD9-201ENST00000350148 DNMT3AQ9Y6K1 912 aaPredicted RBP11.87□□□□□ -0.51
SMAD9-201ENST00000350148 PLXNB2O15031 1838 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 TNFRSF21O75509 655 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 RSL1D1O76021 490 aaKnown RBP11.87□□□□□ -0.51
SMAD9-201ENST00000350148 GLDCP23378 1020 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 OXTRP30559 389 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 RPA4Q13156 261 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 GCNT6Q5T4J0 391 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 GJD3Q8N144 294 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 TEFMQ96QE5 360 aaKnown RBP11.87□□□□□ -0.51
SMAD9-201ENST00000350148 RNF38Q9H0F5 515 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 SRMSQ9H3Y6 488 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 ALG2Q9H553 416 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 MEAF6Q9HAF1 191 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 MRPS30Q9NP92 439 aaKnown RBP11.87□□□□□ -0.51
SMAD9-201ENST00000350148 GPRC5BQ9NZH0 403 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 NDRG2Q9UN36 371 aaKnown RBP11.87□□□□□ -0.51
SMAD9-201ENST00000350148 SNX7Q9UNH6 387 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 OAS3Q9Y6K5 1087 aaKnown RBP11.87□□□□□ -0.51
SMAD9-201ENST00000350148 KIF13BQ9NQT8 1826 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 SLC31A1O15431 190 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 LDB2O43679 373 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 BCL10O95999 233 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 ITGB7P26010 798 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 ARSDP51689 593 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 TNFAIP8L3Q5GJ75 292 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 AGTRAPQ6RW13 159 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 CRTC1Q6UUV9 634 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 BTN2A2Q8WVV5 523 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 GRIP2Q9C0E4 1043 aa11.87□□□□□ -0.51
SMAD9-201ENST00000350148 GPR89AB7ZAQ6 455 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 TRIM24O15164 1050 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 GRID2O43424 1007 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 SIX3O95343 332 aaPredicted RBP11.86□□□□□ -0.51
SMAD9-201ENST00000350148 GPR89BP0CG08 455 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 NUDT1P36639 197 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 ETV4P43268 484 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 TYSND1Q2T9J0 566 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 C2orf27AQ580R0 203 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 KDM1BQ8NB78 822 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 OR4F6Q8NGB9 312 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 SPPL3Q8TCT6 385 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 GIPC3Q8TF64 312 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 SLC47A1Q96FL8 570 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 SPATA7Q9P0W8 599 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 MARCH4Q9P2E8 410 aaPredicted RBP11.86□□□□□ -0.51
SMAD9-201ENST00000350148 HS3ST2Q9Y278 367 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 HS6ST1O60243 411 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 NR2F1P10589 423 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 BPIP17213 487 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 GRM2Q14416 872 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 UNC5DQ6UXZ4 953 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 NUDT13Q86X67 352 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 HIPK1Q86Z02 1210 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 HID1Q8IV36 788 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 C8orf59Q8N0T1 100 aaPredicted RBP11.86□□□□□ -0.51
SMAD9-201ENST00000350148 DEPDC4Q8N2C3 294 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 C11orf65Q8NCR3 313 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 NARS2Q96I59 477 aaKnown RBP11.86□□□□□ -0.51
SMAD9-201ENST00000350148 MYOCQ99972 504 aa11.86□□□□□ -0.51
SMAD9-201ENST00000350148 LRRC3Q9BY71 257 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms