RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 CASKO14936 926 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 CLDN11O75508 207 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 RPL4P36578 427 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 CXCR3P49682 368 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 LRRC73Q5JTD7 316 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 PELOQ9BRX2 385 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 CNPPD1Q9BV87 410 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 BEX2Q9BXY8 128 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 EPB41L4BQ9H329 900 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 MUC13Q9H3R2 512 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 EQTNQ9NQ60 294 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 NIT2Q9NQR4 276 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 ZNF432O94892 652 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 SLITRK5O94991 958 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 BUD31P41223 144 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 POU4F3Q15319 338 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 RALGPS1Q5JS13 557 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 TMEM236Q5W0B7 351 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 OR7D4Q8NG98 312 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 SPATA22Q8NHS9 363 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 RRNAD1Q96FB5 475 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 GAS2L1Q99501 681 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 CHRAC1Q9NRG0 131 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 SH3BGRL2Q9UJC5 107 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 CNOT6Q9ULM6 557 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 SLC27A6Q9Y2P4 619 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 CEPT1Q9Y6K0 416 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 FOXO6A8MYZ6 492 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 AZIN1O14977 448 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 PER2O15055 1255 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 HK3P52790 923 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 TSPAN5P62079 268 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 SEMG2Q02383 582 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 VSTM1Q6UX27 236 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 R3HCC1LQ7Z5L2 792 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 C12orf45Q8N5I9 185 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 RFKQ969G6 155 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 NXPE2Q96DL1 559 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 TWNKQ96RR1 684 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 NIFKQ9BYG3 293 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 SGK2Q9HBY8 427 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 MTMR10Q9NXD2 777 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 EGFL7Q9UHF1 273 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 POU2F3Q9UKI9 436 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 CPQQ9Y646 472 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 ROBO3Q96MS0 1386 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 OR2AG2A6NM03 316 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 STX16-NPEPL1H3BU86 382 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 GTPBP1O00178 669 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 ZBTB48P10074 688 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 CD36P16671 472 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 ACADLP28330 430 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 PAPD4Q6PIY7 484 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 STRADAQ7RTN6 431 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 TMPRSS11BQ86T26 416 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 METTL3Q86U44 580 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 SLC47A1Q96FL8 570 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 RPL10LQ96L21 214 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 ALPK1Q96QP1 1244 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 ERN1O75460 977 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 MSX2P35548 267 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 ZNF33BQ06732 778 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 CDK10Q15131 360 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 SF1Q15637 639 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 DCBLD1Q8N8Z6 715 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 PIGKQ92643 395 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 HMCESQ96FZ2 354 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 DUS2Q9NX74 493 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 ERVK-19Q9WJR5 959 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 MRC1P22897 1456 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 SMCO3A2RU48 225 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 MYBPHLA2RUH7 354 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 H3BNH8 94 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 ENPP3O14638 875 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 RFPL3O75679 317 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 RPS17P08708 135 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 EIF5AP63241 154 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 IRF5Q13568 498 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 GPR68Q15743 365 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 TEX44Q53QW1 395 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 ZNF572Q7Z3I7 529 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 ADAMTS16Q8TE57 1224 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 OR52E6Q96RD3 313 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 CTRCQ99895 268 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 AIF1LQ9BQI0 150 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 C7orf50Q9BRJ6 194 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 ACSS3Q9H6R3 686 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 ANGPT4Q9Y264 503 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 RAP2CQ9Y3L5 183 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 PCDHGC4Q9Y5F7 938 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 A8MU76 341 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 SPIBQ01892 262 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 INTS11Q5TA45 600 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 HECTD2Q5U5R9 776 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 POMZP3Q6PJE2 187 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 KLHL24Q6TFL4 600 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 PGAP1Q75T13 922 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 PHB2Q99623 299 aa10.87□□□□□ -0.67
SMARCE1-202ENST00000348513 NPAS2Q99743 824 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms