RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 OR13F1Q8NGS4 319 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ELMOD3Q96FG2 381 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 IL1RAPQ9NPH3 570 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF70Q9UC06 446 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 HRH3Q9Y5N1 445 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MYH9P35579 1960 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NPIPA5A0A0B4J1W7 369 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ASB14A6NK59 587 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SH3BGRLO75368 114 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ALDH1A2O94788 518 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NAGLUP54802 743 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SLC12A3P55017 1021 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 IL13RA1P78552 427 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 KCNT2Q6UVM3 1135 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NTAN1Q96AB6 310 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ITCHQ96J02 903 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SLC39A10Q9ULF5 831 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 LYVE1Q9Y5Y7 322 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 PTPRJQ12913 1337 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 KERAO60938 352 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RGS9O75916 674 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ZSCAN5DPP0CG00 497 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MC2RQ01718 297 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MPPE1Q53F39 396 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GAREM2Q75VX8 874 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 DDIASQ8IXT1 998 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 LILRB2Q8N423 598 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 OR4C5Q8NGB2 326 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 OR1J4Q8NGS1 313 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 DNAJB14Q8TBM8 379 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SLC7A3Q8WY07 619 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 OTUB2Q96DC9 234 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 WACQ9BTA9 647 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RPF2Q9H7B2 306 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RNF146Q9NTX7 359 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NAGPAQ9UK23 515 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SRPK3Q9UPE1 567 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FBLN1P23142 703 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CRATP43155 626 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TAP2Q03519 686 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 UPP1Q16831 310 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 OTUD3Q5T2D3 398 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 BRAT1Q6PJG6 821 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 IL17RCQ8NAC3 791 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TSEN2Q8NCE0 465 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF566Q969W8 418 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 THUMPD3Q9BV44 507 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 B3GNT5Q9BYG0 378 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ARNT2Q9HBZ2 717 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TREM1Q9NP99 234 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FBXO5Q9UKT4 447 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 LRRTM2O43300 516 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FZD6O60353 706 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 OTCP00480 354 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 KDELR1P24390 212 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SLC1A6P48664 564 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GZMKP49863 264 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 E2F1Q01094 437 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FAM205BPQ63HN1 556 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 PHF13Q86YI8 300 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 EDEM2Q9BV94 578 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RAB11FIP5Q9BXF6 653 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NKIRAS2Q9NYR9 191 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 HCN3Q9P1Z3 774 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 PCDHGA5Q9Y5G8 931 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 APRTP07741 180 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RAB6AP20340 208 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 BGNP21810 368 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RAP1BP61224 184 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 H3F3AP84243 136 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SORDQ00796 357 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CNTN2Q02246 1040 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 PLA2G7Q13093 441 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RBBP7Q16576 425 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NAGSQ8N159 534 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SLC38A4Q969I6 547 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 JPH4Q96JJ6 628 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 KCTD7Q96MP8 289 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CPNE1Q99829 537 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TMPRSS5Q9H3S3 457 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FAM83DQ9H4H8 585 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 PLEKHM1Q9Y4G2 1056 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 A0A1W2PPQ1 181 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MOXD2PA6NHM9 499 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CLIC2O15247 247 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 INSIG1O15503 277 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 DLDP09622 509 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 BTF3P20290 206 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MAGEB1P43366 347 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FMO5P49326 533 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GAGE1Q13065 139 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SF1Q15637 639 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 HIST2H2ACQ16777 129 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 EPHA10Q5JZY3 1008 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 HSD17B13Q7Z5P4 300 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CPNE2Q96FN4 548 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 EBNA1BP2Q99848 306 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ADAM33Q9BZ11 813 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 PIGMQ9H3S5 423 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GSX1Q9H4S2 264 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms