RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 NIPA2Q8N8Q9 360 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 MCFD2Q8NI22 146 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 ZSWIM3Q96MP5 696 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 ABCB9Q9NP78 766 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 THUMPD1Q9NXG2 353 aaKnown RBP14.69□□□□□ -0.06
UBE3B-202ENST00000342494 C19orf25Q9UFG5 118 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-202ENST00000342494 TRAPPC6AO75865 159 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 GPIP06744 558 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 GPR68Q15743 365 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 TPRG1Q6ZUI0 275 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 SLC30A8Q8IWU4 369 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 ARMC5Q96C12 935 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 GABRQQ9UN88 632 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 FAM149AA5PLN7 773 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 ANGPTL1O95841 491 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 PTX3P26022 381 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-202ENST00000342494 SDC2P34741 201 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 GMFBP60983 142 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 RAB2AP61019 212 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 AHSA2Q719I0 299 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 CHERPQ8IWX8 916 aaKnown RBP14.68□□□□□ -0.06
UBE3B-202ENST00000342494 LNX2Q8N448 690 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 FBXL18Q96ME1 805 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 GSC2O15499 205 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 GATMP50440 423 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 MLLT6P55198 1093 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-202ENST00000342494 PDSS1Q5T2R2 415 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 TRMT10BQ6PF06 316 aaKnown RBP14.68□□□□□ -0.06
UBE3B-202ENST00000342494 RNF19BQ6ZMZ0 732 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 KCTD8Q6ZWB6 473 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 ZDHHC21Q8IVQ6 265 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 USP29Q9HBJ7 922 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 RNF186Q9NXI6 227 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 TMEM98Q9Y2Y6 226 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 AKAP8O43823 692 aaKnown RBP14.68□□□□□ -0.06
UBE3B-202ENST00000342494 BDKRB1P46663 353 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 TARDBPQ13148 414 aaKnown RBP eCLIP14.68□□□□□ -0.06
UBE3B-202ENST00000342494 LPCAT4Q643R3 524 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 LRRC66Q68CR7 880 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 NCBP2-AS2Q69YL0 99 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 HFE2Q6ZVN8 426 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 TMEM125Q96AQ2 219 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 IGSF21Q96ID5 467 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 CDK15Q96Q40 435 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 GPN1Q9HCN4 374 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-202ENST00000342494 S100A14Q9HCY8 104 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 SMPD3Q9NY59 655 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-202ENST00000342494 MOCS1Q9NZB8 636 aa14.68□□□□□ -0.06
UBE3B-202ENST00000342494 ANXA2P2A6NMY6 339 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 AGR2O95994 175 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 ANXA2P07355 339 aaKnown RBP14.67□□□□□ -0.06
UBE3B-202ENST00000342494 PRPS1L1P21108 318 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 LAPTM4BQ86VI4 370 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 P2RY13Q9BPV8 354 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 SLC32A1Q9H598 525 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 GDAP2Q9NXN4 497 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 MAN2B2Q9Y2E5 1009 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 SCDO00767 359 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 PCDHGA12O60330 932 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 B4GALT2O60909 372 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 COQ9O75208 318 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 NCK1P16333 377 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 ACVR2AP27037 513 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 IL18R1Q13478 541 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 RBM44Q6ZP01 1051 aaKnown RBP14.67□□□□□ -0.06
UBE3B-202ENST00000342494 LRRC70Q7Z2Q7 622 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 TMEM126BQ8IUX1 230 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 TRPV1Q8NER1 839 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 DNAJB8Q8NHS0 232 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 DHRS1Q96LJ7 313 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 STRADBQ9C0K7 418 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 PPM1HQ9ULR3 514 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 GATBO75879 557 aaKnown RBP14.67□□□□□ -0.06
UBE3B-202ENST00000342494 TSPAN5P62079 268 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 CRELD2Q6UXH1 353 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-202ENST00000342494 LRP10Q7Z4F1 713 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 NATD1Q8N6N6 113 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 DCAF4L2Q8NA75 395 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 GRHL3Q8TE85 626 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 PMM1Q92871 262 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 CAMK1GQ96NX5 476 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 SPATA7Q9P0W8 599 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 ZNF879B4DU55 563 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 ANKRD66B4E2M5 251 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 KLF8O95600 359 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-202ENST00000342494 DHFRP00374 187 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 STATHP02808 62 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 TYRP1P17643 537 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 RPS9P46781 194 aaKnown RBP14.67□□□□□ -0.06
UBE3B-202ENST00000342494 ALDH3A2P51648 485 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 HERVK_113P63132 956 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 DLG1Q12959 904 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 BICRALQ6AI39 1079 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 CAND1Q86VP6 1230 aaKnown RBP14.67□□□□□ -0.06
UBE3B-202ENST00000342494 TWNKQ96RR1 684 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 ZNF347Q96SE7 839 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 ERVK-6Q9BXR3 956 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 TRIM3O75382 744 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-202ENST00000342494 SCARB2Q14108 478 aa14.67□□□□□ -0.06
UBE3B-202ENST00000342494 SPIN4Q56A73 249 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms