RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 TSPEARQ8WU66 669 aa15.01□□□□□ -0.01
LIMK2-203ENST00000340552 L3HYPDHQ96EM0 354 aa15.01□□□□□ -0.01
LIMK2-203ENST00000340552 PPM1MQ96MI6 270 aa15.01□□□□□ -0.01
LIMK2-203ENST00000340552 TRNT1Q96Q11 434 aaKnown RBP15.01□□□□□ -0.01
LIMK2-203ENST00000340552 CYP2S1Q96SQ9 504 aa15.01□□□□□ -0.01
LIMK2-203ENST00000340552 CCDC32Q9BV29 185 aa15.01□□□□□ -0.01
LIMK2-203ENST00000340552 ALG9Q9H6U8 611 aa15.01□□□□□ -0.01
LIMK2-203ENST00000340552 SLC2A6Q9UGQ3 507 aa15.01□□□□□ -0.01
LIMK2-203ENST00000340552 PRG3Q9Y2Y8 225 aaPredicted RBP15.01□□□□□ -0.01
LIMK2-203ENST00000340552 NLRC5Q86WI3 1866 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 LINC00854A0A1B0GVQ3 168 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 AZIN1O14977 448 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 NBNO60934 754 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 POU3F3P20264 500 aaPredicted RBP15□□□□□ -0.01
LIMK2-203ENST00000340552 HNF4AP41235 474 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 IL12RB1P42701 662 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 CXCR4P61073 352 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 POU4F1Q01851 419 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 AAK1Q2M2I8 961 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 CCNJQ5T5M9 372 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 BHLHA9Q7RTU4 235 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 NECAB2Q7Z6G3 386 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 FAM126BQ8IXS8 530 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 EID3Q8N140 333 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 PNPLA1Q8N8W4 532 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 SETD9Q8NE22 299 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 DBF4BQ8NFT6 615 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 OR5K1Q8NHB7 308 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 EDEM1Q92611 657 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 SLC47A1Q96FL8 570 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 FAM193BQ96PV7 902 aaPredicted RBP15□□□□□ -0.01
LIMK2-203ENST00000340552 BBS2Q9BXC9 721 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 RIBC2Q9H4K1 309 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 TMEM161AQ9NX61 479 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 RCOR3Q9P2K3 495 aaPredicted RBP15□□□□□ -0.01
LIMK2-203ENST00000340552 PCDHGB2Q9Y5G2 931 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 ERI2A8K979 691 aaKnown RBP15□□□□□ -0.01
LIMK2-203ENST00000340552 ATP6V1G2-DDX39BF2Z307 99 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 UGT2B17O75795 530 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 RECQL5O94762 991 aaPredicted RBP15□□□□□ -0.01
LIMK2-203ENST00000340552 SIX3O95343 332 aaPredicted RBP15□□□□□ -0.01
LIMK2-203ENST00000340552 CA5AP35218 305 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 KRT20P35900 424 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 UGT2B15P54855 530 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 MLLT6P55198 1093 aaPredicted RBP15□□□□□ -0.01
LIMK2-203ENST00000340552 CDH17Q12864 832 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 EIF2B5Q13144 721 aaKnown RBP15□□□□□ -0.01
LIMK2-203ENST00000340552 EXT2Q93063 718 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 SIGLEC11Q96RL6 698 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15□□□□□ -0.016e-7■■■□□ 15.3
LIMK2-203ENST00000340552 ACTR8Q9H981 624 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 EIF3KQ9UBQ5 218 aaKnown RBP15□□□□□ -0.01
LIMK2-203ENST00000340552 KLHL20Q9Y2M5 609 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 PKP3Q9Y446 797 aa15□□□□□ -0.01
LIMK2-203ENST00000340552 CYP7B1O75881 506 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 SERPINF2P08697 491 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 ERP29P30040 261 aaKnown RBP14.99□□□□□ -0.01
LIMK2-203ENST00000340552 PPP3CCP48454 512 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 GPNMBQ14956 572 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 PAFAH1B3Q15102 231 aaKnown RBP14.99□□□□□ -0.01
LIMK2-203ENST00000340552 ZC3H12BQ5HYM0 836 aaKnown RBP14.99□□□□□ -0.01
LIMK2-203ENST00000340552 ARMC4Q5T2S8 1044 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 KANK2Q63ZY3 851 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 PKN3Q6P5Z2 889 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 CYP4Z1Q86W10 505 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 SPATA2LQ8IUW3 424 aaPredicted RBP14.99□□□□□ -0.01
LIMK2-203ENST00000340552 MARVELD3Q96A59 401 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 NSUN5Q96P11 429 aaKnown RBP14.99□□□□□ -0.01
LIMK2-203ENST00000340552 PSKH2Q96QS6 385 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 SLC9A7Q96T83 725 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 DDIT4Q9NX09 232 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 GLTPQ9NZD2 209 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 LIMD1Q9UGP4 676 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 ORC6Q9Y5N6 252 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 TTC3P53804 2025 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 A0A0B4J293 547 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 A0A1B0GTL3 188 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 EPN2O95208 641 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 FGF4P08620 206 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 OR4Q2P0C623 313 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 ADRA1BP35368 520 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 RPS5P46782 204 aaKnown RBP14.99□□□□□ -0.01
LIMK2-203ENST00000340552 POLR2JP52435 117 aaKnown RBP14.99□□□□□ -0.01
LIMK2-203ENST00000340552 IL1RL1Q01638 556 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 PM20D1Q6GTS8 502 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 SETD6Q8TBK2 473 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 UBE2FQ969M7 185 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 RHBDF1Q96CC6 855 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 RNF31Q96EP0 1072 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 TMEM80Q96HE8 168 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 METTL2AQ96IZ6 378 aaKnown RBP14.99□□□□□ -0.01
LIMK2-203ENST00000340552 APOL4Q9BPW4 351 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 OR51E2Q9H255 320 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 ZNF556Q9HAH1 456 aa14.99□□□□□ -0.01
LIMK2-203ENST00000340552 TMEM189-UBE2V1I3L0A0 370 aa14.98□□□□□ -0.01
LIMK2-203ENST00000340552 LAPTM4AQ15012 233 aa14.98□□□□□ -0.01
LIMK2-203ENST00000340552 STK11Q15831 433 aa14.98□□□□□ -0.01
LIMK2-203ENST00000340552 CAPN13Q6MZZ7 669 aaPredicted RBP14.98□□□□□ -0.01
LIMK2-203ENST00000340552 ZNF767PQ75MW2 155 aa14.98□□□□□ -0.01
LIMK2-203ENST00000340552 C2CD4AQ8NCU7 369 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms