RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 ATXN10Q9UBB4 475 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TCF20Q9UGU0 1960 aaKnown RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 EDDM13A0A1B0GTR0 161 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 FAM234BA2RU67 622 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 MYO1GB0I1T2 1018 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 C1QTNF3-AMACRE9PGA6 284 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 AGRPO00253 132 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 ACOT8O14734 319 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 SLC22A2O15244 555 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 PTGER1P34995 402 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 CDKL1Q00532 357 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 DMC1Q14565 340 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 FRG2Q64ET8 278 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 CES5AQ6NT32 575 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TTC23LQ6PF05 361 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 C1orf52Q8N6N3 182 aaKnown RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 OR5AR1Q8NGP9 310 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 ASB11Q8WXH4 323 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 FAM120BQ96EK7 910 aaKnown RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 FRG2BQ96QU4 278 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 PKP4Q99569 1192 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 CCM2Q9BSQ5 444 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 SORBS1Q9BX66 1292 aaKnown RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 LGR4Q9BXB1 951 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 MRPL40Q9NQ50 206 aaKnown RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 GPSM3Q9Y4H4 160 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 MAGED1Q9Y5V3 778 aaPredicted RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 COL4A4P53420 1690 aaPredicted RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 C15orf38-AP3S2A0A0A6YYH1 394 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 DIRAS1O95057 198 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 PGRP06401 933 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 C8GP07360 202 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 ZNF8P17098 575 aaPredicted RBP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 EPHA5P54756 1037 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 TLR1Q15399 786 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 ATAT1Q5SQI0 421 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 TMTC4Q5T4D3 741 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 C9orf64Q5T6V5 341 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 IRGCQ6NXR0 463 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 ERN2Q76MJ5 926 aaKnown RBP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 ARPINQ7Z6K5 226 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 TRAM1L1Q8N609 369 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 LEMD2Q8NC56 503 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 MYCBPQ99417 103 aaPredicted RBP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 CGREF1Q99674 301 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 GPRC5BQ9NZH0 403 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 A0A1B0GTW7 788 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 MGAT4DA6NG13 374 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 MAGEB17A8MXT2 336 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 SLC28A1O00337 649 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 MAP3K13O43283 966 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 UQCRBP14927 111 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 PSMB5P28074 263 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 P2RY2P41231 377 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 ACADVLP49748 655 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 MRPS35P82673 323 aaKnown RBP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 BLMHQ13867 455 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 RCAN2Q14206 197 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 CCDC85BQ15834 202 aaPredicted RBP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 XKR7Q5GH72 579 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 HENMT1Q5T8I9 393 aaKnown RBP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 ZFP1Q6P2D0 407 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 CPA6Q8N4T0 437 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 FRMD1Q8N878 549 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 MAGED4Q96JG8 741 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 PANX1Q96RD7 426 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 MACROD1Q9BQ69 325 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 DPH2Q9BQC3 489 aaPredicted RBP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 TMEM181Q9P2C4 612 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 STOX2Q9P2F5 926 aaPredicted RBP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 SUCOQ9UBS9 1254 aaKnown RBP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 OAZ3Q9UMX2 235 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 DYRK1BQ9Y463 629 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 PCYT1BQ9Y5K3 369 aaPredicted RBP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 MAGEA13PA6NCF6 341 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 BBIP1A8MTZ0 92 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 RTCAO00442 366 aaKnown RBP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 CISD3P0C7P0 127 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 TBPL1P62380 186 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 SLBPQ14493 270 aaKnown RBP eCLIP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 LDLRAP1Q5SW96 308 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 CLECL1Q8IZS7 167 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 ZNF557Q8N988 423 aaPredicted RBP9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 OR2T12Q8NG77 320 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 PHOSPHO2Q8TCD6 241 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 ROPN1LQ96C74 230 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 OTUB2Q96DC9 234 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 GRIP2Q9C0E4 1043 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 Q9H521 79 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 IKZF5Q9H5V7 419 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 USP34Q70CQ2 3546 aa9.88□□□□□ -0.83
RBFOX1-202ENST00000340209 RFXANKO14593 260 aa9.87□□□□□ -0.83
RBFOX1-202ENST00000340209 EBLN1P0CF75 366 aa9.87□□□□□ -0.83
RBFOX1-202ENST00000340209 CLCNKAP51800 687 aa9.87□□□□□ -0.83
RBFOX1-202ENST00000340209 RPS13P62277 151 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-202ENST00000340209 IRX1P78414 480 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-202ENST00000340209 RHDQ02161 417 aa9.87□□□□□ -0.83
RBFOX1-202ENST00000340209 EMX2Q04743 252 aa9.87□□□□□ -0.83
RBFOX1-202ENST00000340209 UBE3AQ05086 875 aa9.87□□□□□ -0.83
RBFOX1-202ENST00000340209 SGCGQ13326 291 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms