RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 APLFQ8IW19 511 aaPredicted RBP14.34□□□□□ -0.11
RET-201ENST00000340058 AHI1Q8N157 1196 aa14.34□□□□□ -0.11
RET-201ENST00000340058 UTP4Q969X6 686 aaKnown RBP14.34□□□□□ -0.11
RET-201ENST00000340058 SORT1Q99523 831 aa14.34□□□□□ -0.11
RET-201ENST00000340058 IL26Q9NPH9 171 aa14.34□□□□□ -0.11
RET-201ENST00000340058 ABCB10Q9NRK6 738 aa14.34□□□□□ -0.11
RET-201ENST00000340058 SUCOQ9UBS9 1254 aaKnown RBP14.34□□□□□ -0.11
RET-201ENST00000340058 AP3M1Q9Y2T2 418 aa14.34□□□□□ -0.11
RET-201ENST00000340058 TRIM43BA6NCK2 446 aa14.34□□□□□ -0.11
RET-201ENST00000340058 NDUFB5O43674 189 aa14.34□□□□□ -0.11
RET-201ENST00000340058 PI15O43692 258 aa14.34□□□□□ -0.11
RET-201ENST00000340058 ADARP55265 1226 aaKnown RBP14.34□□□□□ -0.11
RET-201ENST00000340058 RPS13P62277 151 aaKnown RBP14.34□□□□□ -0.11
RET-201ENST00000340058 RGS1Q08116 209 aa14.34□□□□□ -0.11
RET-201ENST00000340058 ABRAXAS2Q15018 415 aa14.34□□□□□ -0.11
RET-201ENST00000340058 INAQ16352 499 aa14.34□□□□□ -0.11
RET-201ENST00000340058 TAZQ16635 292 aa14.34□□□□□ -0.11
RET-201ENST00000340058 IER5LQ5T953 404 aa14.34□□□□□ -0.11
RET-201ENST00000340058 KATNBL1Q9H079 304 aa14.34□□□□□ -0.11
RET-201ENST00000340058 ELAC1Q9H777 363 aaKnown RBP14.34□□□□□ -0.11
RET-201ENST00000340058 ADAP2Q9NPF8 381 aa14.34□□□□□ -0.11
RET-201ENST00000340058 ZCCHC3Q9NUD5 404 aaKnown RBP14.34□□□□□ -0.11
RET-201ENST00000340058 ERVW-1Q9UQF0 538 aa14.34□□□□□ -0.11
RET-201ENST00000340058 SNTNA6NMZ2 147 aa14.34□□□□□ -0.11
RET-201ENST00000340058 WASH3PC4AMC7 463 aa14.34□□□□□ -0.11
RET-201ENST00000340058 TSPAN19P0C672 248 aa14.34□□□□□ -0.11
RET-201ENST00000340058 C8orf89P0DMQ9 161 aa14.34□□□□□ -0.11
RET-201ENST00000340058 NT5EP21589 574 aa14.34□□□□□ -0.11
RET-201ENST00000340058 SOX6P35712 828 aa14.34□□□□□ -0.11
RET-201ENST00000340058 TM4SF4P48230 202 aa14.34□□□□□ -0.11
RET-201ENST00000340058 MINDY4Q4G0A6 757 aa14.34□□□□□ -0.11
RET-201ENST00000340058 PTCHD4Q6ZW05 846 aa14.34□□□□□ -0.11
RET-201ENST00000340058 THAP5Q7Z6K1 395 aa14.34□□□□□ -0.11
RET-201ENST00000340058 CELF5Q8N6W0 485 aaKnown RBP14.34□□□□□ -0.11
RET-201ENST00000340058 MDGA1Q8NFP4 955 aa14.34□□□□□ -0.11
RET-201ENST00000340058 SIPA1Q96FS4 1042 aa14.34□□□□□ -0.11
RET-201ENST00000340058 SMURF2Q9HAU4 748 aa14.34□□□□□ -0.11
RET-201ENST00000340058 MRPS7Q9Y2R9 242 aaKnown RBP14.34□□□□□ -0.11
RET-201ENST00000340058 NHSQ6T4R5 1651 aa14.33□□□□□ -0.11
RET-201ENST00000340058 SERPINB7O75635 380 aa14.33□□□□□ -0.12
RET-201ENST00000340058 TRAF3Q13114 568 aa14.33□□□□□ -0.12
RET-201ENST00000340058 DCTN2Q13561 401 aaKnown RBP14.33□□□□□ -0.12
RET-201ENST00000340058 GCNT6Q5T4J0 391 aa14.33□□□□□ -0.12
RET-201ENST00000340058 GPR65Q8IYL9 337 aa14.33□□□□□ -0.12
RET-201ENST00000340058 SLC22A15Q8IZD6 547 aa14.33□□□□□ -0.12
RET-201ENST00000340058 SLC34A3Q8N130 599 aa14.33□□□□□ -0.12
RET-201ENST00000340058 FBXL20Q96IG2 436 aa14.33□□□□□ -0.12
RET-201ENST00000340058 RAD9AQ99638 391 aa14.33□□□□□ -0.12
RET-201ENST00000340058 FANCEQ9HB96 536 aa14.33□□□□□ -0.12
RET-201ENST00000340058 A0A0J9YVX5 310 aa14.33□□□□□ -0.12
RET-201ENST00000340058 RSL1D1O76021 490 aaKnown RBP14.33□□□□□ -0.12
RET-201ENST00000340058 HMGCLP35914 325 aa14.33□□□□□ -0.12
RET-201ENST00000340058 TMED10P49755 219 aaKnown RBP14.33□□□□□ -0.12
RET-201ENST00000340058 GALK1P51570 392 aa14.33□□□□□ -0.12
RET-201ENST00000340058 RHDQ02161 417 aa14.33□□□□□ -0.12
RET-201ENST00000340058 ILF3Q12906 894 aaKnown RBP eCLIP14.33□□□□□ -0.12
RET-201ENST00000340058 NADSYN1Q6IA69 706 aa14.33□□□□□ -0.12
RET-201ENST00000340058 CYS1Q717R9 158 aa14.33□□□□□ -0.12
RET-201ENST00000340058 CHMP1BQ7LBR1 199 aa14.33□□□□□ -0.12
RET-201ENST00000340058 HOMEZQ8IX15 550 aa14.33□□□□□ -0.12
RET-201ENST00000340058 RNFT2Q96EX2 444 aa14.33□□□□□ -0.12
RET-201ENST00000340058 DHRS4Q9BTZ2 278 aa14.33□□□□□ -0.12
RET-201ENST00000340058 CXorf21Q9HAI6 301 aa14.33□□□□□ -0.12
RET-201ENST00000340058 SEMA3GQ9NS98 782 aa14.33□□□□□ -0.12
RET-201ENST00000340058 CACNA1CQ13936 2221 aa14.33□□□□□ -0.12
RET-201ENST00000340058 KRT87PA6NCN2 255 aa14.33□□□□□ -0.12
RET-201ENST00000340058 NPIPB15A6NHN6 443 aaPredicted RBP14.33□□□□□ -0.12
RET-201ENST00000340058 FAM25AB3EWG3 89 aa14.33□□□□□ -0.12
RET-201ENST00000340058 FAM25CB3EWG5 89 aa14.33□□□□□ -0.12
RET-201ENST00000340058 FAM25GB3EWG6 89 aa14.33□□□□□ -0.12
RET-201ENST00000340058 H7BY64 318 aa14.33□□□□□ -0.12
RET-201ENST00000340058 GNB5O14775 395 aa14.33□□□□□ -0.12
RET-201ENST00000340058 NADKO95544 446 aaPredicted RBP14.33□□□□□ -0.12
RET-201ENST00000340058 FABP3P05413 133 aa14.33□□□□□ -0.12
RET-201ENST00000340058 TCEA1P23193 301 aaKnown RBP14.33□□□□□ -0.12
RET-201ENST00000340058 MTAPQ13126 283 aa14.33□□□□□ -0.12
RET-201ENST00000340058 LRRC32Q14392 662 aa14.33□□□□□ -0.12
RET-201ENST00000340058 SEMA3AQ14563 771 aa14.33□□□□□ -0.12
RET-201ENST00000340058 NANOGP8Q6NSW7 305 aa14.33□□□□□ -0.12
RET-201ENST00000340058 OR13J1Q8NGT2 312 aa14.33□□□□□ -0.12
RET-201ENST00000340058 ARRDC2Q8TBH0 407 aa14.33□□□□□ -0.12
RET-201ENST00000340058 FUBP1Q96AE4 644 aaKnown RBP14.33□□□□□ -0.12
RET-201ENST00000340058 BIRC7Q96CA5 298 aa14.33□□□□□ -0.12
RET-201ENST00000340058 PRAP1Q96NZ9 151 aa14.33□□□□□ -0.12
RET-201ENST00000340058 CD244Q9BZW8 370 aa14.33□□□□□ -0.12
RET-201ENST00000340058 EPS8L2Q9H6S3 715 aa14.33□□□□□ -0.12
RET-201ENST00000340058 NANOGQ9H9S0 305 aa14.33□□□□□ -0.12
RET-201ENST00000340058 FARSBQ9NSD9 589 aaKnown RBP14.33□□□□□ -0.12
RET-201ENST00000340058 BACE2Q9Y5Z0 518 aa14.33□□□□□ -0.12
RET-201ENST00000340058 SPTBN2O15020 2390 aa14.32□□□□□ -0.12
RET-201ENST00000340058 A0A1W2PRB8 838 aa14.32□□□□□ -0.12
RET-201ENST00000340058 DYTNA2CJ06 578 aa14.32□□□□□ -0.12
RET-201ENST00000340058 RTCAO00442 366 aaKnown RBP14.32□□□□□ -0.12
RET-201ENST00000340058 AP3D1O14617 1153 aa14.32□□□□□ -0.12
RET-201ENST00000340058 CCNYL3P0C7X3 344 aa14.32□□□□□ -0.12
RET-201ENST00000340058 CCNA2P20248 432 aa14.32□□□□□ -0.12
RET-201ENST00000340058 ZNF10P21506 573 aaPredicted RBP14.32□□□□□ -0.12
RET-201ENST00000340058 FMO3P31513 532 aa14.32□□□□□ -0.12
RET-201ENST00000340058 SGSHP51688 502 aa14.32□□□□□ -0.12
RET-201ENST00000340058 MS4A2Q01362 244 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms