RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ANKFN1Q8N957 763 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 OR8S1Q8NH09 359 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 NCSTNQ92542 709 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 SACM1LQ9NTJ5 587 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 C14orf166Q9Y224 244 aaKnown RBP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 TNFSF13BQ9Y275 285 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 J3QLW9 94 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 RFPL1O75677 317 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 TGFB3P10600 412 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF19P17023 458 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 S100PP25815 95 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 GRK6P43250 576 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 AVPR1BP47901 424 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 TMBIM6P55061 237 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 HSDL1Q3SXM5 330 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 GLB1L3Q8NCI6 653 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 STYXQ8WUJ0 223 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 SCRN2Q96FV2 425 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 TMEM80Q96HE8 168 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 C7orf34Q96L11 122 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 PRRG4Q9BZD6 226 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 EIF5A2Q9GZV4 153 aaKnown RBP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 MMP27Q9H306 513 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 RPP14O95059 124 aaKnown RBP9.6□□□□□ -0.87
COL4A6-201ENST00000334504 ALPPP05187 535 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF3P17036 446 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 MAGEA11P43364 429 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 FAPQ12884 760 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 CTC1Q2NKJ3 1217 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 FAM46CQ5VWP2 391 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 TNFAIP8L2Q6P589 184 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-201ENST00000334504 ERMP1Q7Z2K6 904 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 CFAP52Q8N1V2 620 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 OR2AJ1Q8NGZ0 328 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 OR52B2Q96RD2 323 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SH2B3Q9UQQ2 575 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SLC27A6Q9Y2P4 619 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 HES2Q9Y543 173 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 RENP00797 406 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 DGKEP52429 567 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 MYLK3Q32MK0 819 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SPIN3Q5JUX0 258 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SLC25A25Q6KCM7 469 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SYVN1Q86TM6 617 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF227Q86WZ6 799 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 RELTQ969Z4 430 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 LHX5Q9H2C1 402 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 TAS2R9Q9NYW1 312 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 TBC1D3BA6NDS4 549 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SLC19A2O60779 497 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 CLIC3O95833 236 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 RPLP2P05387 115 aaKnown RBP9.6□□□□□ -0.87
COL4A6-201ENST00000334504 TACSTD2P09758 323 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 MAP2K4P45985 399 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SF1Q15637 639 aaKnown RBP9.6□□□□□ -0.87
COL4A6-201ENST00000334504 ECM1Q16610 540 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 OR2T5Q6IEZ7 315 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 ARSKQ6UWY0 536 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SLC7A5P1Q8MH63 180 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 OR2T29Q8NH02 315 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 PEX13Q92968 403 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 DUSP26Q9BV47 211 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 MRPS33Q9Y291 106 aaKnown RBP9.6□□□□□ -0.87
COL4A6-201ENST00000334504 NT5C1B-RDH14C9J2C7 533 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 TGFB1I1O43294 461 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 PCDHGA12O60330 932 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 TOXO94900 526 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 ANXA3P12429 323 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 GDF10P55107 478 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SNRPD2P62316 118 aaKnown RBP9.6□□□□□ -0.87
COL4A6-201ENST00000334504 CHAF1BQ13112 559 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 ZDHHC24Q6UX98 284 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 ANKRD13BQ86YJ7 626 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 RIPOR3Q96MK2 946 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 PTPN18Q99952 460 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 TPT1P8Q9HAU6 139 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 C14orf105Q9NVL8 296 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 PARPBPQ9NWS1 579 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 HTRA2O43464 458 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-201ENST00000334504 ELFN1P0C7U0 828 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 PRKACGP22612 351 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 AHCYP23526 432 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 CTNNB1P35222 781 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 DSC2Q02487 901 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 RIPPLY1Q0D2K3 151 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 GRHL2Q6ISB3 625 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 FAM129CQ86XR2 697 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 KIAA0319LQ8IZA0 1049 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 ENDOVQ8N8Q3 282 aaKnown RBP9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SPATA22Q8NHS9 363 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 AURKBQ96GD4 344 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-201ENST00000334504 CPXM1Q96SM3 734 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 RPF2Q9H7B2 306 aaKnown RBP9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SMURF1Q9HCE7 757 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 TAS2R10Q9NYW0 307 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SLC17A6Q9P2U8 582 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 KCNN3Q9UGI6 736 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 TRAV19A0A0A6YYK7 116 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 LRRN3E7EW58 273 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 H3BSH0 61 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms