RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ARHGEF33A8MVX0 844 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 AREL1O15033 823 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 CDH1P12830 882 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 HALP42357 657 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 CLDN8P56748 225 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 ST8SIA6P61647 398 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 CYP4F3Q08477 520 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 ACOX1Q15067 660 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 SYTL3Q4VX76 610 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 FRG2Q64ET8 278 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 ERAP2Q6P179 960 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 AADATQ8N5Z0 425 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 WFIKKN2Q8TEU8 576 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 AP2M1Q96CW1 435 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 CMTM7Q96FZ5 175 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 RNF145Q96MT1 663 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 CCDC115Q96NT0 180 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 FRG2BQ96QU4 278 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 CHID1Q9BWS9 393 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 IKZF5Q9H5V7 419 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 PLOD2O00469 737 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 KPNA3O00505 521 aaPredicted RBP16.92■□□□□ 0.3
DDX28-201ENST00000332395 PSIP1O75475 530 aaKnown RBP16.92■□□□□ 0.3
DDX28-201ENST00000332395 RASAL1O95294 804 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 LDLRP01130 860 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 ANXA6P08133 673 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 PRPS2P11908 318 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 MAP4P27816 1152 aaKnown RBP16.92■□□□□ 0.3
DDX28-201ENST00000332395 ABRQ12979 859 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 CHIT1Q13231 466 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 KCNC3Q14003 757 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.92■□□□□ 0.3
DDX28-201ENST00000332395 B3GNT6Q6ZMB0 384 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 RBM44Q6ZP01 1051 aaKnown RBP16.92■□□□□ 0.3
DDX28-201ENST00000332395 CYP2U1Q7Z449 544 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 OR10A6Q8NH74 314 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 PHOSPHO2Q8TCD6 241 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 OSCP1Q8WVF1 389 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 TMEM159Q96B96 161 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 RSPRY1Q96DX4 576 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 MAGEB10Q96LZ2 347 aaPredicted RBP16.92■□□□□ 0.3
DDX28-201ENST00000332395 C8orf4Q9NR00 106 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 PNPLA3Q9NST1 481 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 PADI4Q9UM07 663 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 GMEB1Q9Y692 573 aa16.92■□□□□ 0.3
DDX28-201ENST00000332395 NPIPB8E9PQR5 432 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 C5orf67F2Z3F1 127 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 HOXC11O43248 304 aaPredicted RBP16.91■□□□□ 0.3
DDX28-201ENST00000332395 ATG13O75143 517 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 TULP3O75386 442 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 GMNNO75496 209 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 ADH1CP00326 375 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 JUPP14923 745 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 TACR1P25103 407 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 PRLHRP49683 370 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 PHC1P78364 1004 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 PYCR3Q53H96 274 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 FAM9CQ8IZT9 166 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 METTL25Q8N6Q8 603 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 ZNF548Q8NEK5 533 aaPredicted RBP16.91■□□□□ 0.3
DDX28-201ENST00000332395 BPIFB1Q8TDL5 484 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 HERVK_113Q902F9 699 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 GLMNQ92990 594 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 APIPQ96GX9 242 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 TSSK3Q96PN8 268 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 SH3GL1Q99961 368 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 DNAAF2Q9NVR5 837 aaKnown RBP16.91■□□□□ 0.3
DDX28-201ENST00000332395 CIDEBQ9UHD4 219 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 TMED5Q9Y3A6 229 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 TRBV5-3A0A0A0MS03 114 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 A0A1B0GTW7 788 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 EI24O14681 340 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 NELFEP18615 380 aaKnown RBP16.91■□□□□ 0.3
DDX28-201ENST00000332395 SDC1P18827 310 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 MAPK1P28482 360 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 PREPP48147 710 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 MESP2Q0VG99 397 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 TMEM115Q12893 351 aaPredicted RBP16.91■□□□□ 0.3
DDX28-201ENST00000332395 GTDC1Q4AE62 458 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 RUNDC3AQ59EK9 446 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 RBM23Q86U06 439 aaKnown RBP16.91■□□□□ 0.3
DDX28-201ENST00000332395 RIMKLAQ8IXN7 391 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 LILRA3Q8N6C8 439 aaPredicted RBP16.91■□□□□ 0.3
DDX28-201ENST00000332395 WRAP53Q9BUR4 548 aaKnown RBP16.91■□□□□ 0.3
DDX28-201ENST00000332395 ADI1Q9BV57 179 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 GRIP2Q9C0E4 1043 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 GORASP2Q9H8Y8 452 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 SLC27A6Q9Y2P4 619 aa16.91■□□□□ 0.3
DDX28-201ENST00000332395 CROCCQ5TZA2 2017 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 NUP210Q8TEM1 1887 aaPredicted RBP16.9■□□□□ 0.3
DDX28-201ENST00000332395 SERTM1A2A2V5 107 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 WNT9AO14904 365 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 H6PDO95479 791 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 C7P10643 843 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 S100A3P33764 101 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 VIPR2P41587 438 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 IRF8Q02556 426 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 MERTKQ12866 999 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 NADK2Q4G0N4 442 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 LIPJQ5W064 366 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms