RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 KIAA1217Q5T5P2 1943 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 A0A096LPK6 155 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 NR5A2O00482 541 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 CELF2O95319 508 aaKnown RBP11.58□□□□□ -0.56
SHMT2-201ENST00000328923 ARL2P36404 184 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 PGGT1BP53609 377 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 RPP38P78345 283 aaKnown RBP11.58□□□□□ -0.56
SHMT2-201ENST00000328923 PPP1R8Q12972 351 aaKnown RBP11.58□□□□□ -0.56
SHMT2-201ENST00000328923 MAB21L1Q13394 359 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 RAPSNQ13702 412 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 FGFBP1Q14512 234 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 QPRTQ15274 297 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 SMAD2Q15796 467 aaKnown RBP11.58□□□□□ -0.56
SHMT2-201ENST00000328923 SMN1Q16637 294 aaKnown RBP11.58□□□□□ -0.56
SHMT2-201ENST00000328923 SH3PXD2AQ5TCZ1 1133 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 HEATR6Q6AI08 1181 aaKnown RBP11.58□□□□□ -0.56
SHMT2-201ENST00000328923 TRNP1Q6NT89 227 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 C5orf46Q6UWT4 87 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 GPR63Q9BZJ6 419 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 PLCL2Q9UPR0 1127 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 PAPPA2Q9BXP8 1791 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 ANKRD12Q6UB98 2062 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 TTLL8A6PVC2 850 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 F5H423 210 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-201ENST00000328923 G3V2T6 193 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 FXYD1O00168 92 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 SGCEO43556 437 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 HS6ST1O60243 411 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 MICAL2O94851 1124 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 ERVK-10P10266 1014 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 MGAT1P26572 445 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 CTSKP43235 329 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 CSRP3P50461 194 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 PTPN11Q06124 597 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-201ENST00000328923 RPA4Q13156 261 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 CCINQ13939 588 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 VGLL4Q14135 290 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 GRM3Q14832 879 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 ZNF79Q15937 498 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 GTDC1Q4AE62 458 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 KLHL12Q53G59 568 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 CHMP1BQ7LBR1 199 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 LIMS2Q7Z4I7 341 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 ZNF540Q8NDQ6 660 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 MYO19Q96H55 970 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 PDLIM5Q96HC4 596 aaKnown RBP11.57□□□□□ -0.56
SHMT2-201ENST00000328923 ZSWIM3Q96MP5 696 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 SNRNP25Q9BV90 132 aaKnown RBP11.57□□□□□ -0.56
SHMT2-201ENST00000328923 ITPAQ9BY32 194 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 PIF1Q9H611 641 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 GTSE1Q9NYZ3 720 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 ACTR10Q9NZ32 417 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 DERAQ9Y315 318 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 PCDHGA2Q9Y5H1 932 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 STX16O14662 325 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 RGS10O43665 173 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 PCDHGA12O60330 932 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 HUS1O60921 280 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 HOXD8P13378 290 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-201ENST00000328923 SLC6A2P23975 617 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 CYP2F1P24903 491 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 GLRBP48167 497 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 GSK3BP49841 420 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 CDH8P55286 799 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 VPS26BQ4G0F5 336 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 C4orf46Q504U0 113 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 RABL3Q5HYI8 236 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 ZNF425Q6IV72 752 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 FSTL4Q6MZW2 842 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 SWSAP1Q6NVH7 229 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 ATRAIDQ6UW56 229 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 RIMKLAQ8IXN7 391 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 ADGRG2Q8IZP9 1017 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 CEP76Q8TAP6 659 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 MCCC1Q96RQ3 725 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-201ENST00000328923 PELOQ9BRX2 385 aaKnown RBP11.57□□□□□ -0.56
SHMT2-201ENST00000328923 UGT2B28Q9BY64 529 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 OR51E2Q9H255 320 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 PAK6Q9NQU5 681 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-201ENST00000328923 COPZ2Q9P299 210 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 CTSFQ9UBX1 484 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 PCDHB14Q9Y5E9 798 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 FKBP7Q9Y680 259 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 V9GYH0 126 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 LOC285556D6RIA3 1793 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 OTOFQ9HC10 1997 aa11.57□□□□□ -0.56
SHMT2-201ENST00000328923 A0A1B0GVM2 712 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 GNB5O14775 395 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 FABP7O15540 132 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 TPOP07202 933 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 FHP07954 510 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 SBK3P0C264 359 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 SFTPCP11686 197 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 HK1P19367 917 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 TIE1P35590 1138 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 MTHFRP42898 656 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 SMSP52788 366 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 CDH13P55290 713 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 HERVK_113P63132 956 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 ADAM15Q13444 863 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms