RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 RFWD3Q6PCD5 774 aa13.04□□□□□ -0.32
TRAK1-201ENST00000327628 SLC44A3Q8N4M1 653 aa13.04□□□□□ -0.32
TRAK1-201ENST00000327628 ZNF433Q8N7K0 673 aaPredicted RBP13.04□□□□□ -0.32
TRAK1-201ENST00000327628 LRRN4CLQ8ND94 238 aa13.04□□□□□ -0.32
TRAK1-201ENST00000327628 ZMIZ2Q8NF64 920 aa13.04□□□□□ -0.32
TRAK1-201ENST00000327628 C1orf216Q8TAB5 229 aa13.04□□□□□ -0.32
TRAK1-201ENST00000327628 SLC35B2Q8TB61 432 aa13.04□□□□□ -0.32
TRAK1-201ENST00000327628 KLHL6Q8WZ60 621 aa13.04□□□□□ -0.32
TRAK1-201ENST00000327628 MND1Q9BWT6 205 aa13.04□□□□□ -0.32
TRAK1-201ENST00000327628 ZNF717Q9BY31 904 aaPredicted RBP13.04□□□□□ -0.32
TRAK1-201ENST00000327628 ATG10Q9H0Y0 220 aa13.04□□□□□ -0.32
TRAK1-201ENST00000327628 POLR2J3Q9H1A7 115 aaKnown RBP13.04□□□□□ -0.32
TRAK1-201ENST00000327628 C1orf21Q9H246 121 aa13.04□□□□□ -0.32
TRAK1-201ENST00000327628 MS4A12Q9NXJ0 267 aa13.04□□□□□ -0.32
TRAK1-201ENST00000327628 PTBP2Q9UKA9 531 aaKnown RBP13.04□□□□□ -0.32
TRAK1-201ENST00000327628 LTBP3Q9NS15 1303 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 ADAMTS3O15072 1205 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 NUAK1O60285 661 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 SOCS5O75159 536 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 RAB36O95755 333 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 CST3P01034 146 aaPredicted RBP13.03□□□□□ -0.32
TRAK1-201ENST00000327628 SERINC3Q13530 473 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 SNAP47Q5SQN1 464 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 CMASQ8NFW8 434 aaPredicted RBP13.03□□□□□ -0.32
TRAK1-201ENST00000327628 OR6K2Q8NGY2 324 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 CLHC1Q8NHS4 586 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 ZNF570Q96NI8 536 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 ASPNQ9BXN1 380 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 TDP1Q9NUW8 608 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 TMEM184CQ9NVA4 438 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 HSPB3Q12988 150 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 PCDH19Q8TAB3 1148 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 GPR151Q8TDV0 419 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 TNKS2Q9H2K2 1166 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 GLS2Q9UI32 602 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 OR5K4A6NMS3 321 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 KDELR3O43731 214 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 PFKLP17858 780 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 ATF6P18850 670 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 CSKP41240 450 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 CAPZA1P52907 286 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 LSM3P62310 102 aaKnown RBP13.03□□□□□ -0.32
TRAK1-201ENST00000327628 ST3GAL3Q11203 375 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 CBX3Q13185 183 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 DECR1Q16698 335 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 CXorf57Q6NSI4 855 aaKnown RBP13.03□□□□□ -0.32
TRAK1-201ENST00000327628 RBM23Q86U06 439 aaKnown RBP13.03□□□□□ -0.32
TRAK1-201ENST00000327628 CBR4Q8N4T8 237 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 WRAP53Q9BUR4 548 aaKnown RBP13.03□□□□□ -0.32
TRAK1-201ENST00000327628 BCO2Q9BYV7 579 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 ZNF446Q9NWS9 450 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 FKBP7Q9Y680 259 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 HSD3B1P14060 373 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 EPCAMP16422 314 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 HSD3B2P26439 372 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 TSPAN5P62079 268 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 PCDH1Q08174 1060 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 MBLAC2Q68D91 279 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 PYHIN1Q6K0P9 492 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 SH3RF2Q8TEC5 729 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 ZNF641Q96N77 438 aaPredicted RBP13.03□□□□□ -0.32
TRAK1-201ENST00000327628 COPS4Q9BT78 406 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 DKK3Q9UBP4 350 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 TIMM22Q9Y584 194 aa13.03□□□□□ -0.32
TRAK1-201ENST00000327628 IFNA21P01568 189 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 ATP1B2P14415 290 aaPredicted RBP13.02□□□□□ -0.32
TRAK1-201ENST00000327628 MTTPP55157 894 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 GPM6BQ13491 265 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 CBFBQ13951 182 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 ABCA11PQ4W5N1 156 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 PLEKHG4Q58EX7 1191 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 BAIAP2L2Q6UXY1 529 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 TPRG1Q6ZUI0 275 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 OR10G2Q8NGC3 310 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 SGCDQ92629 289 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 KCTD7Q96MP8 289 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 LENG8Q96PV6 779 aaPredicted RBP13.02□□□□□ -0.32
TRAK1-201ENST00000327628 CIB1Q99828 191 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 BHLHE41Q9C0J9 482 aaPredicted RBP13.02□□□□□ -0.32
TRAK1-201ENST00000327628 SLC22A4Q9H015 551 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 RMI1Q9H9A7 625 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 ACSL5Q9ULC5 683 aa13.02□□□□□ -0.32
TRAK1-201ENST00000327628 FAM159BA6NKW6 160 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 SCDO00767 359 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 CYP11A1P05108 521 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 PAX7P23759 505 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 OR3A3P47888 321 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 OR3A2P47893 321 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 MEDAGQ5VYS4 303 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 FRG2Q64ET8 278 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 PPP2R2DQ66LE6 453 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 AHSA2Q719I0 299 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 NAT14Q8WUY8 206 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 MFSD3Q96ES6 412 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 FBXL18Q96ME1 805 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 FRG2BQ96QU4 278 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 GAL3ST4Q96RP7 486 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 NDC1Q9BTX1 674 aa13.02□□□□□ -0.33
TRAK1-201ENST00000327628 GOLGA2P5Q9HBQ8 144 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms