RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 RUNDC3AQ59EK9 446 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 LRIF1Q5T3J3 769 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 HMBOX1Q6NT76 420 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 ZBTB49Q6ZSB9 765 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 REPS1Q96D71 796 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 TRAPPC9Q96Q05 1148 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 DPEP2Q9H4A9 486 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 HPS4Q9NQG7 708 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 NDUFA13Q9P0J0 144 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 PCDHGA11Q9Y5H2 935 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 A0A096LPI6 279 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 NPC1O15118 1278 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 INPP4BO15327 924 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 MYO1DO94832 1006 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 ANXA6P08133 673 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 C6P13671 934 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 AMD1P17707 334 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 PRPS1L1P21108 318 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 SRSF11Q05519 484 aaKnown RBP13.54□□□□□ -0.24
VAMP2-201ENST00000316509 RUNX3Q13761 415 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 PTGR1Q14914 329 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 SUSD1Q6UWL2 747 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 MFSD2AQ8NA29 543 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 WDR20Q8TBZ3 569 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 CXorf40AQ8TE69 158 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 HHIPQ96QV1 700 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 OR52E6Q96RD3 313 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 WRAP53Q9BUR4 548 aaKnown RBP13.54□□□□□ -0.24
VAMP2-201ENST00000316509 CDH7Q9ULB5 785 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 AURKCQ9UQB9 309 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 RUVBL1Q9Y265 456 aaKnown RBP13.54□□□□□ -0.24
VAMP2-201ENST00000316509 KCNE2Q9Y6J6 123 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 DNMT3AQ9Y6K1 912 aaPredicted RBP13.54□□□□□ -0.24
VAMP2-201ENST00000316509 ALPK3Q96L96 1907 aa13.54□□□□□ -0.24
VAMP2-201ENST00000316509 KLHL33A6NCF5 533 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 TBC1D3BA6NDS4 549 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 LILRB5O75023 590 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 TIPRLO75663 272 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 SCELO95171 688 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 SOD1P00441 154 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 CDH1P12830 882 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 GGT1P19440 569 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 ITPKAP23677 461 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 TXNL4AP83876 142 aaKnown RBP13.53□□□□□ -0.24
VAMP2-201ENST00000316509 RPA4Q13156 261 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 XKR6Q5GH73 641 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.53□□□□□ -0.24
VAMP2-201ENST00000316509 TMTC4Q5T4D3 741 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 ZNF648Q5T619 568 aaPredicted RBP13.53□□□□□ -0.24
VAMP2-201ENST00000316509 IFNEQ86WN2 208 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 GALNT4Q8N4A0 578 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 ZNF366Q8N895 744 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 BIRC7Q96CA5 298 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 MTFMTQ96DP5 389 aaKnown RBP13.53□□□□□ -0.24
VAMP2-201ENST00000316509 PPM1MQ96MI6 270 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 TMEM74Q96NL1 305 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 PKP4Q99569 1192 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 UGT2B28Q9BY64 529 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 ATG10Q9H0Y0 220 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 ITM2CQ9NQX7 267 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 SPATA6Q9NWH7 488 aaPredicted RBP13.53□□□□□ -0.24
VAMP2-201ENST00000316509 GMPR2Q9P2T1 348 aaKnown RBP13.53□□□□□ -0.24
VAMP2-201ENST00000316509 VPS29Q9UBQ0 182 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 PADI4Q9UM07 663 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 PIKFYVEQ9Y2I7 2098 aa13.53□□□□□ -0.24
VAMP2-201ENST00000316509 GRXCR1A8MXD5 290 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 TNFAIP8O95379 198 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 C1orf105O95561 183 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 LINGO3P0C6S8 592 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 FCARP24071 287 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 TRPC1P48995 793 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 POLE2P56282 527 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 CYP4F3Q08477 520 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 NAE1Q13564 534 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 ATP6AP1Q15904 470 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 ADRM1Q16186 407 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 POM121L1PQ3SYA9 428 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 SPANXN4Q5MJ08 99 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 RAET1GQ6H3X3 334 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 CAPN13Q6MZZ7 669 aaPredicted RBP13.52□□□□□ -0.24
VAMP2-201ENST00000316509 ADAMTSL4Q6UY14 1074 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 RIMKLAQ8IXN7 391 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 YAF2Q8IY57 180 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 TMEM132CQ8N3T6 1108 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 HM13Q8TCT9 377 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 SETD7Q8WTS6 366 aaKnown RBP13.52□□□□□ -0.24
VAMP2-201ENST00000316509 PYCR2Q96C36 320 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 WDR34Q96EX3 536 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 ZNF583Q96ND8 569 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 GBP5Q96PP8 586 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 SEMA6AQ9H2E6 1030 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 EHD1Q9H4M9 534 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 ZNF696Q9H7X3 374 aa13.52□□□□□ -0.24
VAMP2-201ENST00000316509 TRBV5-3A0A0A0MS03 114 aa13.52□□□□□ -0.25
VAMP2-201ENST00000316509 TMEM202A6NGA9 273 aa13.52□□□□□ -0.25
VAMP2-201ENST00000316509 PRAMEF4O60810 478 aa13.52□□□□□ -0.25
VAMP2-201ENST00000316509 FAM58BPP0C7Q3 252 aa13.52□□□□□ -0.25
VAMP2-201ENST00000316509 ZCCHC18P0CG32 403 aa13.52□□□□□ -0.25
VAMP2-201ENST00000316509 HLA-EP13747 358 aa13.52□□□□□ -0.25
VAMP2-201ENST00000316509 IL1RNP18510 177 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms