RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 SPACA6W5XKT8 324 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 MATN4O95460 622 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 ALDOCP09972 364 aaKnown RBP13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 NR2F1P10589 423 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 ENGP17813 658 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 SSR2P43308 183 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 MBTPS1Q14703 1052 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 ATAD3BQ5T9A4 648 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 EIF3MQ7L2H7 374 aaKnown RBP13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 TTLL2Q9BWV7 592 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 ARMC7Q9H6L4 198 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 KLHL28Q9NXS3 571 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 PDE10AQ9Y233 779 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 UGT2B11O75310 529 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 SLC16A1P53985 500 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 SLBPQ14493 270 aaKnown RBP eCLIP13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 CCDC85BQ15834 202 aaPredicted RBP13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 ZNF648Q5T619 568 aaPredicted RBP13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 PDE12Q6L8Q7 609 aaKnown RBP13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 ZFAND4Q86XD8 727 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 COL26A1Q96A83 441 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 SOX17Q9H6I2 414 aaPredicted RBP13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 PLGRKTQ9HBL7 147 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 CMTM6Q9NX76 183 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 TRPS1Q9UHF7 1281 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 KLHL20Q9Y2M5 609 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 TGFB1P01137 390 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 ADH5P11766 374 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 CDC42P60953 191 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 PAGE3Q5JUK9 113 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 BHLHA9Q7RTU4 235 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 TMEM25Q86YD3 366 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 ADGRG2Q8IZP9 1017 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 OR5K1Q8NHB7 308 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 RAD51AP1Q96B01 352 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 HERC2P3Q9BVR0 1158 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 FAIM2Q9BWQ8 316 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 TESMINQ9Y4I5 508 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 PAPPA2Q9BXP8 1791 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 NPIPB15A6NHN6 443 aaPredicted RBP13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 CREG1O75629 220 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 RFPL2O75678 378 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 MMP2P08253 660 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 BCKDHAP12694 445 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 HSD17B1P14061 328 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 RFC2P35250 354 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 ITGADQ13349 1161 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 SPATS1Q496A3 300 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 GCNT6Q5T4J0 391 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 SLC39A11Q8N1S5 342 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 SHKBP1Q8TBC3 707 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 CCM2Q9BSQ5 444 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 REXO4Q9GZR2 422 aaKnown RBP13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 DAPK2Q9UIK4 370 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 DOCK3Q8IZD9 2030 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 ISM1B1AKI9 464 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 DENRO43583 198 aaKnown RBP13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 PCSK2P16519 638 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 CTGFP29279 349 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 SOX6P35712 828 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 EIF2B2P49770 351 aaKnown RBP13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 RFTN2Q52LD8 501 aaPredicted RBP13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 PSRC1Q6PGN9 363 aaPredicted RBP13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 CRTC1Q6UUV9 634 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 FIBINQ8TAL6 211 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 LINC01599Q8WXQ3 324 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 NUS1Q96E22 293 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 SLC22A12Q96S37 553 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 YIPF2Q9BWQ6 316 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 KLHL25Q9H0H3 589 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 SPHK2Q9NRA0 654 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 AASDHPPTQ9NRN7 309 aa13.07□□□□□ -0.32
PCDHB9-201ENST00000316105 ARID2Q68CP9 1835 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 GUCY1B2O75343 617 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 FADS2O95864 444 aaKnown RBP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 PDYNP01213 254 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 RHOP08100 348 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 SRCP12931 536 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 HLA-EP13747 358 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 GALK1P51570 392 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 PTPN5P54829 565 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 TMEM207Q6UWW9 146 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 CROCCP3Q8IVE0 287 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 MMAAQ8IVH4 418 aaKnown RBP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 WFIKKN2Q8TEU8 576 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 POF1BQ8WVV4 589 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 NODALQ96S42 347 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 HMG20AQ9NP66 347 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 TMEM181Q9P2C4 612 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 ZNFX1Q9P2E3 1918 aaKnown RBP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 TNFRSF11BO00300 401 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 FBP2O00757 339 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 UBFD1O14562 309 aaKnown RBP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 RSL1D1O76021 490 aaKnown RBP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 DDX6P26196 483 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 HTR1EP28566 365 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 MAPK12P53778 367 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 DEFA1P59665 94 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 DEFA3P59666 94 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 DEFB103AP81534 67 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms