RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 PLAGL1Q9UM63 463 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 CYP8B1Q9UNU6 501 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 MYRFQ9Y2G1 1151 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 KLHL20Q9Y2M5 609 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 U3KQV3 271 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 SDHDO14521 159 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 NPC1O15118 1278 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 IGLV3-25P01717 112 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 ZDHHC11BP0C7U3 371 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 IFNGR2P38484 337 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 ZNF140P52738 457 aaPredicted RBP13.33□□□□□ -0.28
DDX54-202ENST00000314045 HSPB3Q12988 150 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 LPCAT4Q643R3 524 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 MBOAT1Q6ZNC8 495 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 DEFB119Q8N690 84 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 TTLQ8NG68 377 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 TMEM245Q9H330 911 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 NOL6Q9H6R4 1146 aaKnown RBP13.33□□□□□ -0.28
DDX54-202ENST00000314045 CNOT6Q9ULM6 557 aaKnown RBP13.33□□□□□ -0.28
DDX54-202ENST00000314045 SCN1AP35498 2009 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 G6PDP11413 515 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 GNSP15586 552 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 VARSP26640 1264 aaKnown RBP13.33□□□□□ -0.28
DDX54-202ENST00000314045 SERPINB10P48595 397 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 DHPSP49366 369 aaPredicted RBP13.33□□□□□ -0.28
DDX54-202ENST00000314045 UFM1P61960 85 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 HKDC1Q2TB90 917 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 SLC5A11Q8WWX8 675 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 TADA1Q96BN2 335 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 REXO5Q96IC2 774 aaKnown RBP13.33□□□□□ -0.28
DDX54-202ENST00000314045 SLC39A3Q9BRY0 314 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 OR51B5Q9H339 312 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 ZBTB26Q9HCK0 441 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 RAPGEFL1Q9UHV5 662 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 SUFUQ9UMX1 484 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 OARD1Q9Y530 152 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 DNAJA2O60884 412 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 SERPINI2O75830 405 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 MPC1LP0DKB6 136 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 COPZ1P61923 177 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 CYP4F3Q08477 520 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 MTX3Q5HYI7 312 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 MANEALQ5VSG8 457 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 CXorf57Q6NSI4 855 aaKnown RBP13.32□□□□□ -0.28
DDX54-202ENST00000314045 ADGRG2Q8IZP9 1017 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 OFCC1Q8IZS5 231 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 MCCC1Q96RQ3 725 aaPredicted RBP13.32□□□□□ -0.28
DDX54-202ENST00000314045 CFHR5Q9BXR6 569 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 MUC13Q9H3R2 512 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 PCDH10Q9P2E7 1040 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 SH3GLB1Q9Y371 365 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 MAN2B1O00754 1011 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 GPR39O43194 453 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 CNOT3O75175 753 aaKnown RBP13.32□□□□□ -0.28
DDX54-202ENST00000314045 NCK1P16333 377 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 PTX3P26022 381 aaPredicted RBP13.32□□□□□ -0.28
DDX54-202ENST00000314045 GCAP28676 217 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 HOXA9P31269 272 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 CSNK1DP48730 415 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 DIO3P55073 304 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 GRIN2CQ14957 1233 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 SLC14A2Q15849 920 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 C6orf136Q5SQH8 315 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 TANGO2Q6ICL3 276 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 ARMCX6Q7L4S7 300 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 TRIM69Q86WT6 500 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 NUDT13Q86X67 352 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 TMCO5AQ8N6Q1 288 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 NACC2Q96BF6 587 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 PCDHAC1Q9H158 963 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 ANKRD12Q6UB98 2062 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 PTPRZ1P23471 2315 aaPredicted RBP13.32□□□□□ -0.28
DDX54-202ENST00000314045 A0A0J9YVX5 310 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 ERN1O75460 977 aaKnown RBP13.32□□□□□ -0.28
DDX54-202ENST00000314045 NT5EP21589 574 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 NOS3P29474 1203 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 ALDH4A1P30038 563 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 SLC9A5Q14940 896 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 PPP1R3AQ16821 1122 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 FBXO43Q4G163 708 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 TREML1Q86YW5 311 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 STX19Q8N4C7 294 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 FUBP1Q96AE4 644 aaKnown RBP13.32□□□□□ -0.28
DDX54-202ENST00000314045 SLC47A1Q96FL8 570 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 OR2M4Q96R27 311 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 CIB1Q99828 191 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 SLC17A9Q9BYT1 436 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 SCHIP1Q9P0W5 487 aaPredicted RBP13.32□□□□□ -0.28
DDX54-202ENST00000314045 ATP6V1HQ9UI12 483 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 HS3ST2Q9Y278 367 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 AXIN1O15169 862 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 ITGAXP20702 1163 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 GJA4P35212 333 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 EMX2Q04743 252 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 GCNT6Q5T4J0 391 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 C16orf87Q6PH81 154 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 SYVN1Q86TM6 617 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 LRRC58Q96CX6 371 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 WDR92Q96MX6 357 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 SEC14L3Q9UDX4 400 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms