RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 PCSK2P16519 638 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 OTX2P32243 289 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 CCR7P32248 378 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 FOLR3P41439 243 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 GRIA1P42261 906 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 CSE1LP55060 971 aaKnown RBP7.84□□□□□ -1.15
TPM3-203ENST00000312970 PRAMEP78395 509 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 ACVR1Q04771 509 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 HSPA14Q0VDF9 509 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 OASLQ15646 514 aaKnown RBP7.84□□□□□ -1.15
TPM3-203ENST00000312970 KYNUQ16719 465 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 DEFB110Q30KQ9 67 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 NKAIN1Q4KMZ8 207 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 SEL1L2Q5TEA6 688 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 TMEM139Q8IV31 216 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 SLC22A15Q8IZD6 547 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 ZNF655Q8N720 491 aaPredicted RBP7.84□□□□□ -1.15
TPM3-203ENST00000312970 CLEC1AQ8NC01 280 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 DENND1AQ8TEH3 1009 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 C1orf54Q8WWF1 131 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 ATG4AQ8WYN0 398 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 PEX13Q92968 403 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 PNPLA2Q96AD5 504 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 THAP11Q96EK4 314 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 SEC16BQ96JE7 1060 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 ZNF778Q96MU6 729 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 GBP5Q96PP8 586 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 SPOCK3Q9BQ16 436 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 DESI2Q9BSY9 194 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 NDC1Q9BTX1 674 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 CASS4Q9NQ75 786 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 RAB6BQ9NRW1 208 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 TXLNGQ9NUQ3 528 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 IRAK4Q9NWZ3 460 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 DHCR7Q9UBM7 475 aaKnown RBP7.84□□□□□ -1.15
TPM3-203ENST00000312970 SLC2A6Q9UGQ3 507 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 NDOR1Q9UHB4 597 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 PLAGL1Q9UM63 463 aa7.84□□□□□ -1.15
TPM3-203ENST00000312970 PTRH2Q9Y3E5 179 aaKnown RBP7.84□□□□□ -1.15
TPM3-203ENST00000312970 CCDC88CQ9P219 2028 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 APCP25054 2843 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 CD3EAPO15446 510 aaKnown RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 SLCO2B1O94956 709 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 AGFG2O95081 481 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 APOA4P06727 396 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 APRTP07741 180 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 CTSBP07858 339 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 PIM1P11309 404 aaPredicted RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 ETS1P14921 441 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 CD9P21926 228 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 ALAS2P22557 587 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 AOAHP28039 575 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 PEBP1P30086 187 aaKnown RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 PKLRP30613 574 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 UQCRFS1P47985 274 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 TTPAP49638 278 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 RAB28P51157 221 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 ARSFP54793 590 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 SNX1Q13596 522 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 RAPSNQ13702 412 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 SEMA3AQ14563 771 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 SF1Q15637 639 aaKnown RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 MSS51Q4VC12 460 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 ZC3H12BQ5HYM0 836 aaKnown RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 AARS2Q5JTZ9 985 aaKnown RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 PCID2Q5JVF3 399 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 DCAF10Q5QP82 559 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 VWA5B1Q5TIE3 1220 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 SLC6A19Q695T7 634 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 MRPL14Q6P1L8 145 aaKnown RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 TTC23LQ6PF05 361 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 UNC5DQ6UXZ4 953 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 C4orf22Q6V702 233 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 ZNF534Q76KX8 674 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 MRGPREQ86SM8 312 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 LAPTM4BQ86VI4 370 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 SLC13A5Q86YT5 568 aaPredicted RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 VRK3Q8IV63 474 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 MCATQ8IVS2 390 aaKnown RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 GALNT16Q8N428 558 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 C2orf73Q8N5S3 287 aaPredicted RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 RBMXL3Q8N7X1 1067 aaKnown RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 CCDC89Q8N998 374 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 Q8NA96 180 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 PPHLN1Q8NEY8 458 aaKnown RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 OR2Y1Q8NGV0 311 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 CFAP61Q8NHU2 1237 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 GSDMBQ8TAX9 411 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 DLG3Q92796 817 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 ZUFSPQ96AP4 578 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 NACC2Q96BF6 587 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 C12orf49Q9H741 205 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 ATP13A2Q9NQ11 1180 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 CHRAC1Q9NRG0 131 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 INTS7Q9NVH2 962 aaKnown RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 P4HTMQ9NXG6 502 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 EURLQ9NYK6 297 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.83□□□□□ -1.16
TPM3-203ENST00000312970 PAK5Q9P286 719 aa7.83□□□□□ -1.16
TPM3-203ENST00000312970 PLEKHB1Q9UF11 243 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms