RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 FBXO44Q9H4M3 255 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 MAGIXQ9H6Y5 334 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 SLC6A13Q9NSD5 602 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 C14orf119Q9NWQ9 140 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 BTBD3Q9Y2F9 522 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF451Q9Y4E5 1061 aa10.89□□□□□ -0.67
PTPN7-201ENST00000309017 TSC2P49815 1807 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF236Q9UL36 1845 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 TPD52L2O43399 206 aaKnown RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ERN1O75460 977 aaKnown RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 B3GALT4O96024 378 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 EPB42P16452 691 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 SOX6P35712 828 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 LIPAP38571 399 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 YBEYP58557 167 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 TUBA1BP68363 451 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 CREMQ03060 361 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ELP6Q0PNE2 266 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 INO80DQ53TQ3 878 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 USP43Q70EL4 1123 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 TUBA1AQ71U36 451 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ZBED2Q9BTP6 218 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 BBS2Q9BXC9 721 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ELOVL6Q9H5J4 265 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 AASDHPPTQ9NRN7 309 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 THG1LQ9NWX6 298 aaKnown RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 IMPAD1Q9NX62 359 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 NAALAD2Q9Y3Q0 740 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 RAI2Q9Y5P3 530 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 KCNK2O95069 426 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 TSPAN12O95859 305 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 KRT6AP02538 564 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 KRT6BP04259 564 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 FPR1P21462 350 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 CASP3P42574 277 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 RGRP47804 291 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 KRT6CP48668 564 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 MRPL19P49406 292 aaKnown RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 MRPS6P82932 125 aaKnown RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 SOWAHCQ53LP3 525 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ATG9BQ674R7 924 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 PDE12Q6L8Q7 609 aaKnown RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 MSRB3Q8IXL7 192 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 CELF2-AS1Q8N7Q2 184 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 SPPL2AQ8TCT8 520 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 KCNJ9Q92806 393 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 Q96MT0 163 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 PANX1Q96RD7 426 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 SEPT5Q99719 369 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 C1QTNF3Q9BXJ4 246 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 TMEM45AQ9NWC5 275 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 RAPGEFL1Q9UHV5 662 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 WBP11Q9Y2W2 641 aaKnown RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 PCDHGB1Q9Y5G3 927 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 PNMA8CA0A1B0GUJ8 204 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 FAM220BPB1ANY3 271 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 LOC730098B7Z3J9 87 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 LOC110117498-PIK3R3F6TDL0 507 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 TFECO14948 347 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ANKRD28O15084 1053 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 INSIG1O15503 277 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ESR1P03372 595 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 RPLP0P05388 317 aaKnown RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 BCKDHAP12694 445 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 CTPS1P17812 591 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 OR2B6P58173 313 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 FAM189BP81408 668 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ZC3H12BQ5HYM0 836 aaKnown RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 SUSD1Q6UWL2 747 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 Q6ZPB1 254 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 SLC22A15Q8IZD6 547 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 METTL4Q8N3J2 472 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 CLDN19Q8N6F1 224 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ATAD1Q8NBU5 361 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 IPCEF1Q8WWN9 437 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF566Q969W8 418 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 KCNS3Q9BQ31 491 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 TSEN34Q9BSV6 310 aaKnown RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ADGRE3Q9BY15 652 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 HOXD1Q9GZZ0 328 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 RNF38Q9H0F5 515 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 TM9SF3Q9HD45 589 aa10.88□□□□□ -0.67
PTPN7-201ENST00000309017 THUMPD1Q9NXG2 353 aaKnown RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 ARIH1Q9Y4X5 557 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-201ENST00000309017 PDCD11Q14690 1871 aaKnown RBP10.87□□□□□ -0.67
PTPN7-201ENST00000309017 TRIP12Q14669 1992 aaPredicted RBP10.87□□□□□ -0.67
PTPN7-201ENST00000309017 ZW10O43264 779 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 CCNDBP1O95273 360 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 CD6P30203 668 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 CPT1AP50416 773 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 ABHD18Q0P651 414 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 KEAP1Q14145 624 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 ARMC4Q5T2S8 1044 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 LAIR1Q6GTX8 287 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 FAM151BQ6UXP7 276 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 C10orf111Q8N326 155 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 PARP16Q8N5Y8 322 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 NPLOC4Q8TAT6 608 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 MYDGFQ969H8 173 aa10.87□□□□□ -0.67
PTPN7-201ENST00000309017 RNF167Q9H6Y7 350 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms