RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 CDKN1CP49918 316 aaPredicted RBP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 SRP54P61011 504 aaKnown RBP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 KRT33BQ14525 404 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 ZBTB6Q15916 424 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 SMN1Q16637 294 aaKnown RBP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 ZNF284Q2VY69 593 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 ATXN7L2Q5T6C5 722 aaPredicted RBP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 Q8N9G6 341 aaPredicted RBP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 UHRF1Q96T88 793 aaPredicted RBP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 C11orf84Q9BUA3 381 aaPredicted RBP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 OSBPL10Q9BXB5 764 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 MAGEH1Q9H213 219 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 ATP13A3Q9H7F0 1226 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 C11orf16Q9NQ32 467 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 A0A0D9SEW6 157 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 ANKDD1BA6NHY2 528 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 UPK3BL1B0FP48 263 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 UPK3BL2E5RIL1 263 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 PTGESO14684 152 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 DYRK3O43781 588 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 PSIP1O75475 530 aaKnown RBP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 SEC14L2O76054 403 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 CSF2P04141 144 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 BMP4P12644 408 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 TNNI3P19429 210 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 MAPKAPK2P49137 400 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 GRSF1Q12849 480 aaKnown RBP eCLIP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 UBE2UQ5VVX9 321 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 PSAPL1Q6NUJ1 521 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 VTCN1Q7Z7D3 282 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 PHOX2BQ99453 314 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 TRIM45Q9H8W5 580 aaPredicted RBP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 POPDC3Q9HBV1 291 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 ATP6V1HQ9UI12 483 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 DYRK1BQ9Y463 629 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 ISPDA4D126 451 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 HAT1O14929 419 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 TBL1XO60907 577 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 KCNQ1P51787 676 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 PTPN5P54829 565 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 HECTD3Q5T447 861 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 PIK3R6Q5UE93 754 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 TAPT1Q6NXT6 567 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 NETO1Q8TDF5 533 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 NUDT8Q8WV74 236 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 IGSF8Q969P0 613 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 Q96MT0 163 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 TRNT1Q96Q11 434 aaKnown RBP13.15□□□□□ -0.31
SEC23A-201ENST00000307712 ATOH8Q96SQ7 321 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 TMEM246Q9BRR3 403 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 MROQ9BYG7 248 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 TM9SF3Q9HD45 589 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 ERVK13-1Q9NX77 482 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 ZNF624Q9P2J8 865 aaPredicted RBP13.15□□□□□ -0.31
SEC23A-201ENST00000307712 SPATA2Q9UM82 520 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 PCDHB8Q9UN66 801 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 MAP4K5Q9Y4K4 846 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 PCDHB14Q9Y5E9 798 aa13.15□□□□□ -0.31
SEC23A-201ENST00000307712 TARM1B6A8C7 271 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 NT5C1B-RDH14C9J2C7 533 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 CLDN11O75508 207 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 ALPIP09923 528 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 CD40LGP29965 261 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 CCT3P49368 545 aaKnown RBP13.14□□□□□ -0.31
SEC23A-201ENST00000307712 LGI4Q8N135 537 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 UMODL1-AS1Q8N2C9 162 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 MYO19Q96H55 970 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 ZBED3Q96IU2 234 aaPredicted RBP13.14□□□□□ -0.31
SEC23A-201ENST00000307712 IRF2BPLQ9H1B7 796 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 TP63Q9H3D4 680 aaPredicted RBP13.14□□□□□ -0.31
SEC23A-201ENST00000307712 ZNF385DQ9H6B1 395 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 SARDHQ9UL12 918 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 GLYATL1P3A0A0U1RQE8 302 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 SMIM30A4D0T7 59 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 MANBAO00462 879 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 CPNE3O75131 537 aaKnown RBP13.14□□□□□ -0.31
SEC23A-201ENST00000307712 ANXA4P09525 319 aaPredicted RBP13.14□□□□□ -0.31
SEC23A-201ENST00000307712 IFI30P13284 250 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 GADD45AP24522 165 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 ITGA1P56199 1179 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 MCCD1P59942 119 aaPredicted RBP13.14□□□□□ -0.31
SEC23A-201ENST00000307712 ADARB1P78563 741 aaKnown RBP13.14□□□□□ -0.31
SEC23A-201ENST00000307712 GANABQ14697 944 aaKnown RBP13.14□□□□□ -0.31
SEC23A-201ENST00000307712 USP41Q3LFD5 358 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 DESI1Q6ICB0 168 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 DEF8Q6ZN54 512 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 PGAP3Q96FM1 320 aaPredicted RBP13.14□□□□□ -0.31
SEC23A-201ENST00000307712 C8orf48Q96LL4 319 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 TUBB1Q9H4B7 451 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 DNAJC11Q9NVH1 559 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 ABCD2Q9UBJ2 740 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 MOSPD1Q9UJG1 213 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 FCF1Q9Y324 198 aaKnown RBP13.14□□□□□ -0.31
SEC23A-201ENST00000307712 FABP12A6NFH5 140 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 FXYD1O00168 92 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 ACSL4O60488 711 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 STSP08842 583 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 BCKDHAP12694 445 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 PIGAP37287 484 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms